Gene Pcar_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0144 
Symbol 
ID3722957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp178721 
End bp180280 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content55% 
IMG OID637749721 
Producthypothetical protein 
Protein accessionYP_355575 
Protein GI77917760 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTCG ATTTCTGGCT GTTGCCGGTT GTTGCTTTTT TATTCCTGGT CGTGTCGACC 
ATCATTTTTC TGGCTTCACG CTACAAACGC TGCCCATCGG ATAATATCCT GGTGATTTAC
GGTAAGGTCG GTGCGGGGCA ATCGGCCCGT TGTATCCATG GCGGCGGGAC CATGGTCTGG
CCTCTGATAC AGGATTACGC GTACCTGAGC TTGACGCCGA TGACCATTAA TATCCCTTTG
CAGAAGGCGC TCTCGATGCA GAATATCCGC ATCAATGTGC CGTCGACTTT TACGGTAGGG
ATCAGCACTG AATCGCAGAT CATGACAGCC GCTGCGGAGC GCCTGTTACA TCTCGGACAA
CATCAGATCG AGGAGATGGC CAAGGAAATC ATCTTCGGCC AGTTGCGCTT GACCGTCGCC
TCCTTGACCA TCGAACAGAT TAATCAGGAT CGTGAGCGGT TCCTTGAGTC GATCCGTAAG
AATGTCGCTC CTGAGCTGAA CAAGATCGGT CTTTACCTGA TCAACGTTAA CATTACCGAC
ATTACGGATG AGTCCGGGTA TATCGACTCC ATTGGTAAGA AAGCCGCTGC CGAGGCCATT
AACCAGGCCA AGGTTGATGT GGCCGAGCAG GAAAAAACGG GCGCGATTGG CGAAGCCGAG
GCGGTTCGGG AAAAGGAGAT CCGGGTAGCG GAAAATGTAG CCGGTTCGGA AAAGGGTAAA
AAACAGGCCG AAGCGGATCA GCGGGTGTTT GTGCAGCAAC AGGAAGCCAA TGCTCGGGTT
GGTGAGGCGG CTGCCGATCG CCAGAAAGAG ATAGGCGTCG CCGAGAATCT GGCCGAAGCC
GAAAAAGGTA AAAAGCGTGC CCAGGCCGAC CAGCGGGTTT ACGTGCAGCA ACAGGAAGCG
ACCGCTGTTG AAGGGGAAAA TAAATCCAAA GCCGATATCG CCAACTATAA TGCCGAACTG
GCGGTCAAAC AGGCCGCCGC CATGCAACTC GGCGAAGTAG CCAGGCGTGA AGCCGAGGTA
GAGATTCAGA AGGCCCAGGC CAAAGCTGAG CAGGAGCGCT TGGTAGCCGC CGAAGTGGTG
CGTCAGGAAA TCGATAAACG CAAGGTGGAG ATCGCCGCCG AGGCCGAAGC CGAAAAAACG
CGTCGCGAAG CCAAAGGGGC CGCCGATGCG ATCCTGCTCA AGTACCAGGC CGAGGCTGAA
GGGGTGCGGA AAGTTCTGGA GAGCAAGGCG TTCGGCTATC TCGAGTTGGT CAAGGGGTGT
AACGGTGACG CCAAGTCCGC CGCGACTCTT CTGATGACCG AAAAAATTGA GCAGATCGTG
CAATTGCAGG TTGAGGCGAT CCGCAATATC AAGATCGACA AAGTGACGGT CTGGGACGGT
GCAGGGGGCG ATAAAACCTC AACAGCCAAT TTCCTTTCGG GCCTGGTCAA GAGTTTGCCG
CCATTGCACG ATGTTGCCGC CATGGCCGGC ATCGACCTGC CGCAGTATCT CGGTAATATT
GCCGATCCGT CCTCCCAACC ACAGCCCGTT TCAGACGGGA ATATAAGCCC GGCAAAGTGA
 
Protein sequence
MVFDFWLLPV VAFLFLVVST IIFLASRYKR CPSDNILVIY GKVGAGQSAR CIHGGGTMVW 
PLIQDYAYLS LTPMTINIPL QKALSMQNIR INVPSTFTVG ISTESQIMTA AAERLLHLGQ
HQIEEMAKEI IFGQLRLTVA SLTIEQINQD RERFLESIRK NVAPELNKIG LYLINVNITD
ITDESGYIDS IGKKAAAEAI NQAKVDVAEQ EKTGAIGEAE AVREKEIRVA ENVAGSEKGK
KQAEADQRVF VQQQEANARV GEAAADRQKE IGVAENLAEA EKGKKRAQAD QRVYVQQQEA
TAVEGENKSK ADIANYNAEL AVKQAAAMQL GEVARREAEV EIQKAQAKAE QERLVAAEVV
RQEIDKRKVE IAAEAEAEKT RREAKGAADA ILLKYQAEAE GVRKVLESKA FGYLELVKGC
NGDAKSAATL LMTEKIEQIV QLQVEAIRNI KIDKVTVWDG AGGDKTSTAN FLSGLVKSLP
PLHDVAAMAG IDLPQYLGNI ADPSSQPQPV SDGNISPAK