Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1938 |
Symbol | |
ID | 4908266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1803691 |
End bp | 1804800 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640125689 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_001056820 |
Protein GI | 126460542 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGTAG TGGACAAGCC CGGCTTCTAT GACTATGTGT CTGGGGAGAG GGTGGTGATA AACGCCAGCG ACGTGAAAAT AGGCGTCTTA GAGGTACGCG GAGGCGGGGG CGAAGTGGCC CTCCCGAGGG AGATGACGGC TTACAAGGTT AAGCCCACGG TGGGCTGCGT CGTGGTGATC GGCGAGCGGG TTGCCGTGGA GGCGGCGCGG GTACACTGCG TCAACGGCTT GCTCATCTTC AACTCCACAG ACGTCTACAT AGGCAGGCTG GAGATGTGGG GAGACCCCTC TCTCCCGGTC TACCGCCGCG GCCTCGGCTT CTACGTTTTT GGGAGTAGAA ACGTCACTGT CAACGCGGCT GTGGGGGGCT ACTTCCACGA CTGCATCTAC GCCGAGTACA GCTCTGCCCT CCGCATAGGC AACTTCTCCC TCGCCTCTTG TAGATACGGC GTGCATATAA TGTTCAGCGA CGGCGTCTCG GTGGCCAACG GCGTCGTTAG AGACAGCTAC GTGGGCGTGG CCGTCATGTA TACCTCAAAC GCCACGGTAA AGGGGGTCGA GGCGGTGGAC AACCGGGAGT GGTCCGAGGG GTACGGCTTC CTAATAGCCG AGGTGAGGGG CGGAGCAGTG GAGGACTGCA GAGCCGTGGG CAACATCCAT GGCTTCTACG TCTTGACCTG GGGCGGCACC GCCGTGGCCG TGTCCAACTG CGCCATTGAG GGGAACTACG TGGGAGTGAC GATTAGGGGC AAGGGCTCGT CGGGAGTCGC GTTTTACAAC AACTCGCTCC TCGGCAACGT GGTGCAGGTA GTGTACATGG CCATAGGCGA AGACTTCCCA CAGGCACGGT TCGTGGGCAA CATGTGGCAG GGCCACGGCA CCTCTGCCCC TTACGTCTAC GTAAGCGCCT TCTCAGACCT CTTCACGGCC ACGGAGGGGG CACTGGGGTG GCTTGCCGCC TTTCCGGCCA GGGCTGTGAT CGACGGCGTG GCTGGGAGGC CCCTGGCCTT TGACCCAAGC CCGGCCCCCG CCCGCGGCGG CTCCCCCTGG CAGTTGGCCC TCCTCTTTGC ACTGCCCATT GTAGCATACG CAGCGCGGAG GCGGGCATGA
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Protein sequence | MVVVDKPGFY DYVSGERVVI NASDVKIGVL EVRGGGGEVA LPREMTAYKV KPTVGCVVVI GERVAVEAAR VHCVNGLLIF NSTDVYIGRL EMWGDPSLPV YRRGLGFYVF GSRNVTVNAA VGGYFHDCIY AEYSSALRIG NFSLASCRYG VHIMFSDGVS VANGVVRDSY VGVAVMYTSN ATVKGVEAVD NREWSEGYGF LIAEVRGGAV EDCRAVGNIH GFYVLTWGGT AVAVSNCAIE GNYVGVTIRG KGSSGVAFYN NSLLGNVVQV VYMAIGEDFP QARFVGNMWQ GHGTSAPYVY VSAFSDLFTA TEGALGWLAA FPARAVIDGV AGRPLAFDPS PAPARGGSPW QLALLFALPI VAYAARRRA
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