Gene Pcal_1928 details

Gene Information

• Locus tag: Pcal_1928
• ID: 4908255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1794959
• End bp: 1796980
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640125679
• Product: nitrous-oxide reductase
• Protein accession: YP_001056810
• Protein GI: 126460532
• COG category: [C] Energy production and conversion
• COG ID: [COG4263] Nitrous oxide reductase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGGGCTGG TGGGGGGCCT CGCCTTAAGC CAGCTCTTGG CCAAGGGGGC TGTGGCGCCG 
GCGCCCCCCG GCGTGTCGGC ACGGGTCCAA GAATTGGCCG CGGCAAGAGG GCTGTCGCCT 
CAAGACGTAG AAAATGCCGT GGCCACGTAT CTCCCCGGAG GGAAGTACGA CGAGTTCTAC 
ATGTTCTCAA GCGGCGGCCA CTCGGGGCAG GTGGCGGTCT ACGGCCTTCC CTCTTTGAAG 
CTCTACCGCA TAATAGCCGT ATTCACTCCC GAGCCTTGGC AGGGCTGGGG CTACCACGAT 
AGGAAGACCA TGGAAGTTCT CTTCAGCGAG AGAGCCACCG CTGGCAGGCC GCTCAGCTGG 
GGCGACACCC ACCACCCCGA GTTCGATAGG CAAAACGCCG AATATGTCGG CAGATGGCTG 
TTCATTGGCG ACAAAGTGAA CGGGAGAGCA GCCGCCATTT CCCTACTAGA CTTTGAGACC 
AAGGACATTG TAAAAATCCC CAATGTACAA ACTATCCACG GCGGCGCCTT CACTACTCCA 
AACACGGAGT ACGTCTTATA CGCCACGCAG TATCCAGCGC CTTGGGAGCC GGGCAGAGGA 
TATAAGCCAG GTGTCACCAA GGTCCCGTGG AGCCAAGTGG TAAAAGATGA AAAGTACTTC 
TGGGAGTACA TGAGGGGTGC CCTCACGTTC CTCGCCTTTG ACCGTAACAC TGGGAGATTC 
GACTTGTCGA AAAGCTTCCA AATAGAGGTC CCGCCCTATG TGCAAGACCT TTCCACAATA 
TCCTGGGGCC CCGGCGACGG TTTGGCGTTT GTCAACTCCT TTGGCACAGA GGGCATGTTC 
GGAGAGACGC CATATGAGGC AAAGTTGTCT AAGAACGACT ACGACCTGTT ACACATAGTG 
CTGTGGAGAA AGGCTGAGGA CCTCTGCTTG AGGCAAGGCC GTTGCAAGGA GATAAACGGC 
ATAAAAGTCC TCTCCCTAGA GGACGCGATT AAGGAGGGGG TGTTGTTCTT TGTTAGAGAG 
CCCAAGAGTC CCCACGGCGT AGATACATCC CCCGGCGGGC ACTTTATATC TGTGGGAGGC 
AAACTGGCCC CCTACGCCAC AGTCTACAGC ACGGAGAAGA TAAAGCAGGC CATTGCAGAT 
AAGAAGTTCG AGGGGCAGGA CAGATACGGA GTGCCTATAT TGGACTACGG TAGCGTGGTT 
GCGGGACAGG TGGAGGTCTG CCTAGGCCCA CTACACACAG AATTCGACGG GAGAGGCAAC 
GCCTACATCA GTTGCTTCGT GGAAAATGTA GTAACAAAAT TCACCCTAGG CTCGCCCGAG 
TACAGAGGCG ATAAGCCGTT CACAGTGGTA GACAAAGTGC AGATACACTA CAACGTGGGC 
CACATATGTG TGCCAGAGTC TAATTCGCCT AATCCAGCTG GGAAGTATCT AGTGGCGTTG 
AACAAGTGGT CAATAGACAG ATTCTTCCCA GTGGGGCCGC TTAAGCCTCA GAACTTCCAG 
CTAATAGATA TATCTGGTGA TAAGATGAGG CTACTCGCAG AGGTGCCCGT GGGCTGGGGC 
GAGCCGCACT ACGCCAAGGC TATACGGGCT GAGAAGATAA AGCCGCTTGA CGTATATCCA 
GTGGGCACGG ACCCCCACGT CATGAAAGAT GGCCAGTTCC AGTTGAGCTC CAATGCGGTG 
ACTGAAATAG GCAAGGAGCG GGTGCAGAGG TATCAGCTAC CAGACGGGAG GTGGGTCACT 
GAGGTTTGGG GCACGGTGAT TAGGTCGACT ATAAGGCCTA ACATTATTGT GGCAAAGAAG 
GGCGACATAG TGCGCCTCCA CTTAACCAAC ATAGAGAAGA GCGTAGATGC CACACATGGC 
CTTGCCATTG CTGAGTACAA TGTGGCGGCC TCGCTGGAGC CCGGCGAATA TGCCGAGATA 
GAGTTTGTGG CAGATATACC CGGCGTATTT GCCTTCTACT GCTACGAGTT CTGCTCACCG 
CTCCACTTAG AAATGGTGGG ATGGCTGGTA GTAGAGGAGT AA 

 

Protein sequence

MGLVGGLALS QLLAKGAVAP APPGVSARVQ ELAAARGLSP QDVENAVATY LPGGKYDEFY 
MFSSGGHSGQ VAVYGLPSLK LYRIIAVFTP EPWQGWGYHD RKTMEVLFSE RATAGRPLSW 
GDTHHPEFDR QNAEYVGRWL FIGDKVNGRA AAISLLDFET KDIVKIPNVQ TIHGGAFTTP 
NTEYVLYATQ YPAPWEPGRG YKPGVTKVPW SQVVKDEKYF WEYMRGALTF LAFDRNTGRF 
DLSKSFQIEV PPYVQDLSTI SWGPGDGLAF VNSFGTEGMF GETPYEAKLS KNDYDLLHIV 
LWRKAEDLCL RQGRCKEING IKVLSLEDAI KEGVLFFVRE PKSPHGVDTS PGGHFISVGG 
KLAPYATVYS TEKIKQAIAD KKFEGQDRYG VPILDYGSVV AGQVEVCLGP LHTEFDGRGN 
AYISCFVENV VTKFTLGSPE YRGDKPFTVV DKVQIHYNVG HICVPESNSP NPAGKYLVAL 
NKWSIDRFFP VGPLKPQNFQ LIDISGDKMR LLAEVPVGWG EPHYAKAIRA EKIKPLDVYP 
VGTDPHVMKD GQFQLSSNAV TEIGKERVQR YQLPDGRWVT EVWGTVIRST IRPNIIVAKK 
GDIVRLHLTN IEKSVDATHG LAIAEYNVAA SLEPGEYAEI EFVADIPGVF AFYCYEFCSP 
LHLEMVGWLV VEE