| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1844 |
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| Symbol | |
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| ID | 4908398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1703947 |
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| End bp | 1705188 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125594 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001056727 |
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| Protein GI | 126460449 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.437172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAA AACTTCTGGC CGCAATACTT GCCGTAGTTG TTGTAATTAT CGCCGCGGTG
CTACTGGCCT GGCCTCCGGC CCAAGCCCCC GCCACTACAA CTAGCCCCGG CGCGCAGACC
ACCACCCAAG CGGCAAAGCA GTCTATCTAT GTGATATACG ACATAGGTGG GAGAGGCGAC
TTGTCTTTTA ACGACATGGC GTATCTAGGC GCCTCTAAAG CCGCGAGAGA CTTCGGGCTA
GGGCTGAAGG AGGTTCAAAG CAAGACGCAG GACGACTATG TGCCAAATCT GAGGGCAGCC
GCGCGCTCTG GCGACGCTGC GCTGATCGTC GCCGTCGGCT TTCTAATGAC TGACGCGGTA
AAGCAGGTGT CGCAGGAGTA CCCCAACGCC AAGTTTGCCA TAGTGGACGG CTATGTGCCA
GACAGGCCTA ACGTTGTATC TATCTTGTTT AGGGAGAATG AGGGCTCTGC GTTAGTGGGC
GCTCTGGCGG CCTTGACGGC CTACTACTAC AACTGCACAA AGGTCGGCAT TGTGCTAGGC
ATGGAGATCC CAGTGTTGTG GAAATTTGAA ATTGGGTACG CCTACGGCGT GAGGTGGGCC
GAGCGTTATG TAAAGCAGAA GTTTGGGAAA GACATAAAGT TCGACATATA CTACATATAC
ACCGGCTCTT TCAACGACCC GGCGAAGGGC AAACAGGCGG CAGAGGTCAT GCTTTCCCAA
GGCGTCTGCG TAATTTACCA AGCCGCGGGC GCCACTGGCT TAGGAGTGTT TGAGGCCGTG
GCAGAGGCTG GGAAGAGGGC TGGACGGACC ATGGGCCCGC CTTTTGCGAT AGGCGTCGAC
GCCGACCAAG ACTACATCAA GCCCGGCTTC ATTTTGGCGT CTATGATGAA GCGCGTAGAT
GTAGGCGTTT ACAAGGCCGC GGAGATGGCC GCCAGGGGCA CTTTTAAGGG CGGCGTCCTC
GAGTTGGGCT TAAAGGACGG AGGCGTTGGC GTAAGCACCT TAGACGACTT GACTCAGTTC
ATAGAGATAG GGGTTAGAGC TGGCGCCGTG AGGCAAGAAG ACGCGCAGAA CATTGTAAAC
ACTGTGAGAG CCATGAGGTC TCAGATACCG AGCTGGGTGT GGGAGGGCGT CGACGTGTTG
AAACAGGACA TAATATCTGG GCGGGAGAAG GTTCCGCTTC CAACTACCCA GGACGAGGTG
AACGCGCTTA GGAGAGAGCT CGGCCTAGGC GCCGCTAAGT AA
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| Protein sequence | MNSKLLAAIL AVVVVIIAAV LLAWPPAQAP ATTTSPGAQT TTQAAKQSIY VIYDIGGRGD
LSFNDMAYLG ASKAARDFGL GLKEVQSKTQ DDYVPNLRAA ARSGDAALIV AVGFLMTDAV
KQVSQEYPNA KFAIVDGYVP DRPNVVSILF RENEGSALVG ALAALTAYYY NCTKVGIVLG
MEIPVLWKFE IGYAYGVRWA ERYVKQKFGK DIKFDIYYIY TGSFNDPAKG KQAAEVMLSQ
GVCVIYQAAG ATGLGVFEAV AEAGKRAGRT MGPPFAIGVD ADQDYIKPGF ILASMMKRVD
VGVYKAAEMA ARGTFKGGVL ELGLKDGGVG VSTLDDLTQF IEIGVRAGAV RQEDAQNIVN
TVRAMRSQIP SWVWEGVDVL KQDIISGREK VPLPTTQDEV NALRRELGLG AAK
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