Gene Pcal_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1804 
SymbolpyrH 
ID4908658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp1672537 
End bp1673190 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID640125553 
Producturidylate kinase 
Protein accessionYP_001056687 
Protein GI126460409 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0528] Uridylate kinase 
TIGRFAM ID[TIGR02076] uridylate kinase, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.513591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGC TTAAGCTTAC AGGCAGAATT TTCGACGAAG AAGACCTCGT GGCCAAATAC 
GCAGCTATAA TAAGGCGCAT AGGCGGAAAA GTGGCCGTGG TAACTGGAGG CGGCGAAGTG 
GCGAGGAGGT ACATAGCCAT GGCGCGAAAG GGCGGCGCCT CCAACACTTT CCAAGACCTG 
CTAGGGATAT ACGCCAGCCG GCTAAACGCC CTCCTGTTAA TTTCGCTAAT CGGCGACGAC 
GCCTACCCAA AGGCCCCCTC AACAGTGGAA GAGTTCCTCG ACGCGTGGAG GAGGCACCGC 
GTCGTGGTGG CCGGGGGCTT TCAGCCGGGG CAATCCACGG CGACTGTGGC AGCCCTCGTG 
GCAGAGGCGG CGGGCGCCTC TGTCCTCCTC AACGCGGCAA ATATCGACGC CGTGTACGAC 
GACGACCCCA GGAGAAACCC CAACGCTAGA AAAATACCGA CGCTTACATA CGACGAGCTT 
GAGAGAATTC TAAAAACAAG CGTCGTGCCA GGGGGCTACG AGCTCGTTGA CCCTTGGAGT 
ATATCAATAC TGCGGAGGAA CTGCGTGACT ACATACATAT TCGACGGAAG GAGGCCGGAA 
TATGTCGAAG AAATACTGCG GGGTGGGAAC CCCGGTAGCA AAATAACGTG TTGA
 
Protein sequence
MLVLKLTGRI FDEEDLVAKY AAIIRRIGGK VAVVTGGGEV ARRYIAMARK GGASNTFQDL 
LGIYASRLNA LLLISLIGDD AYPKAPSTVE EFLDAWRRHR VVVAGGFQPG QSTATVAALV 
AEAAGASVLL NAANIDAVYD DDPRRNPNAR KIPTLTYDEL ERILKTSVVP GGYELVDPWS 
ISILRRNCVT TYIFDGRRPE YVEEILRGGN PGSKITC