Gene Pcal_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1474 
Symbol 
ID4908930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1373360 
End bp1373731 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content54% 
IMG OID640125223 
Producthypothetical protein 
Protein accessionYP_001056359 
Protein GI126460081 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTG GAATCATAGT GGGGAGCGGC GACTTTGTGA GACTGTACGA ATTTGCCACG 
CTTGTGTCTA CGCTGGTGGC CAGGGGCGAG GAGGTTAGCA TATTCGTCAC CGGGGAGGCT
GTCAAGGCGT TTAAAAAAGA GTACGCCCCT CCCCTATCCT CGCCAGAGCA CAAGAGAATC
GTGGAGTTGG GCGTGGATTG GAAGTCCCTG CTCTCTACAG CGAAGTCCAT AGGGAGCGTC
AAGGTATACG TCTGCGAAAC GGCCAGCAAG ATCTTTGGAA TCTCCGAGGA GGAGTATGAC
CCCGCGCTTG TGGACAAGGT CACCTCAATG TACACCTTCC TGGAGGAAGT GGACAGACTA
GTAGTATTTT AG
 
Protein sequence
MAFGIIVGSG DFVRLYEFAT LVSTLVARGE EVSIFVTGEA VKAFKKEYAP PLSSPEHKRI 
VELGVDWKSL LSTAKSIGSV KVYVCETASK IFGISEEEYD PALVDKVTSM YTFLEEVDRL
VVF