| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1343 |
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| Symbol | |
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| ID | 4910301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1260266 |
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| End bp | 1261036 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640125095 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001056231 |
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| Protein GI | 126459953 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.753846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCTT TCTTGTATGG GTGGGTTTTG TGGATTGGGC TTGGGGTTGG GGCTGTGTTG
GGGGTGGTGG GGTGGCTTGG GTTTAGGAGG GCTGTGTTTG TGTACCGTCT GGAGGGGCAG
ATTCCGCAGG TGCTCCGCAT GGTGGCGGAC GCGGTGGGGG CTGGGATGGG GCTGAGGGAG
GCGTTTGAGG TGGTGGCGGG GATGGGGCTG TACCCGGCGA ATGCGGTTTT TAGGCGGGTG
CTCTCGCTGG CGGAGGTGGG TGGGCTGGCG GTGGATGAGG CTCTTTGGAG AGTGGCCTCG
GAGCTCCCCT CCCCCAATTT TAGGAGGTTT GCCCTTATCG TGGCTGAGGG GGCGAGGAGT
GGTGCTAGGC TGGGGGAGGT GCTCGGCGTG GCGGCGAGGA GCTTCGCCGT GGTGGTGGAC
TTTAGGCGGG AGTTGTGGTC TCAGCTGAGG CCCTACGTGG CGCTTTTCTA CGCCGTGGTG
GCGGTGTACG TCGTCCTCGC CGACGTCTTG GTATACTTCC TACTGCCCAG CGTGGCTAAG
TTCTCCGCCT CCGGGGGGCC CTGGGGAGGA GTCTCCGCCT CTGTGCCCCC GAGGGAGGAG
CTTGTGCCAG TCCTCTTCCT CACGGCCCTC GTCCAGTCGG TGATCGGCGG CCTCATCGTG
GGGAGGCTCG CGTACTTTAG CCCCCGGGCT GGGCTTCTGC ACAGCGGCGT TGCGTCGGCG
GCCTCGGCGG TGGGGCTAGT GGCCCCGGCG TGGCTTGGGT GGCAGCCATG A
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| Protein sequence | MFSFLYGWVL WIGLGVGAVL GVVGWLGFRR AVFVYRLEGQ IPQVLRMVAD AVGAGMGLRE
AFEVVAGMGL YPANAVFRRV LSLAEVGGLA VDEALWRVAS ELPSPNFRRF ALIVAEGARS
GARLGEVLGV AARSFAVVVD FRRELWSQLR PYVALFYAVV AVYVVLADVL VYFLLPSVAK
FSASGGPWGG VSASVPPREE LVPVLFLTAL VQSVIGGLIV GRLAYFSPRA GLLHSGVASA
ASAVGLVAPA WLGWQP
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