Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1225 |
Symbol | |
ID | 4909906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1139628 |
End bp | 1140767 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640124979 |
Product | hypothetical protein |
Protein accession | YP_001056116 |
Protein GI | 126459838 |
COG category | [C] Energy production and conversion |
COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.229478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGGC AGGAGGCTGT AGAGAGGGCG AGGGCGCACA TTGTGCCTAG GACGTACGAG GTGTTGCAGA GGTTTGAATA CGTCAGAGAG TTGGCCAAGG AGGTGAGGAA GGCGCGGGAG GAGGTGGTCA AGAACTTGGA CTACTACATT GAGGAGGCGA GGAGGGCCGT GGAGCGGATA GGCGGGCGCT TCTACCTAGC CGCCACGGGG GAGGAGGCCG TTGAGACTGT GGCAAAGATC GTGGGGAGGG GCAAGGTGGT GGTAATGAGC AAGAACAACG TGGCCACGGA GACTGGGCTT AGGCAGAGGC TTGAGGCGGC GGGCAACGAG GTGTGGGAGA CGGACTTGGG CGAGTTCTTG ATACAGCTGG CCGGGGATGA GCCGAGCCAC ATACTCGCCC CCGCAGTCCA CATGACCAAG GAGAGGGCGG CCGAGGTGCT TAGGCAGAGG CTTGGAATCG CCGTTCCCCC AGAGGCGGAG GCCATTGCGC AGAGGGCGAG GGAGTTTTTG AGGGAGAAGT TCCTAAGGGC AGACGTGGGG ATCACAGGTG CAAACGCCAT AGCCGCAGAC ACGGGGGCGG TGGTGCTCGT GGAAAACGAG GGCAACATTA GGATGACCAC AGTGTTGCCG CCGGTCCACA TAGTCTACGA CGGCGTGGAG AAGGTAGTCC CCACGCTACA CCACGCCTTC ATGTCCGCCA TGGTGCAGTC CGCCTACGCT GGCCTCTACC CGCCCACCTA CGTAAACCTC TCCGCGGGCC CGAGCTCCAC GGCTGACGTG GAAATGCGCC GGGTGTCCCC CGCCCAGGGG CCGCGTGAAT TCCACGTGGT GCTTGTAGAC AACGGGAGGA GGAAGGCCGC CAAAGACCCA GACCTATGGG AGGCGCTCCT CTGCATAAGG TGCGGCCGCT GCCACCTCCA CTGCCCAGTC TACCTGACGC TGGGCAGAGA GTTTGGGAGG CCCCCCTACA CGGGGCCCAT GGGCGTGATG TGGACAGCGG TTACGCGGGG CATAGAGGAG GCCGGCCCAC ACGCGCTTAA GTGCGTACAC GCGGGGAACT GCAGAGAGGT GTGCCCAATG TCAATAGACA TCCCCAAGGT GATACACGCA ATAAGGGCCA GATATCTAAG GGCGCGTTAG
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Protein sequence | MSWQEAVERA RAHIVPRTYE VLQRFEYVRE LAKEVRKARE EVVKNLDYYI EEARRAVERI GGRFYLAATG EEAVETVAKI VGRGKVVVMS KNNVATETGL RQRLEAAGNE VWETDLGEFL IQLAGDEPSH ILAPAVHMTK ERAAEVLRQR LGIAVPPEAE AIAQRAREFL REKFLRADVG ITGANAIAAD TGAVVLVENE GNIRMTTVLP PVHIVYDGVE KVVPTLHHAF MSAMVQSAYA GLYPPTYVNL SAGPSSTADV EMRRVSPAQG PREFHVVLVD NGRRKAAKDP DLWEALLCIR CGRCHLHCPV YLTLGREFGR PPYTGPMGVM WTAVTRGIEE AGPHALKCVH AGNCREVCPM SIDIPKVIHA IRARYLRAR
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