Gene Pcal_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0947 
Symbol 
ID4909979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp894926 
End bp895204 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content52% 
IMG OID640124695 
ProductDNA/RNA-binding protein albA 
Protein accessionYP_001055838 
Protein GI126459560 
COG category[K] Transcription 
COG ID[COG1581] Archaeal DNA-binding protein 
TIGRFAM ID[TIGR00285] DNA-binding protein Alba 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAG AACAGACAAT ACTAGTGGGC AAGAAACCCA CGACAAACTA CGTAATAGCT 
ACAGTGATGG CGTTCAACGC CGGAATTAAA AGAGTAGTGC TAAAGGCCAG AGGCGCCGCG
ATATCCAAGG CTGTGTCAAC AGCCGTGATG GTTAGAGATA GGTTCCTGCC AGGCAAAGTC
CAGATAAGAG ATGTAAAGTT GCTCAGCGAC AAGGTGCAAG GCCAAGGCGG CAGAGAGCGC
ACGGTCGCGG CCGTTGAGAT AGTGCTCGAA ATGGCCTAA
 
Protein sequence
MATEQTILVG KKPTTNYVIA TVMAFNAGIK RVVLKARGAA ISKAVSTAVM VRDRFLPGKV 
QIRDVKLLSD KVQGQGGRER TVAAVEIVLE MA