| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0938 |
|---|
| Symbol | |
|---|
| ID | 4909052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 887164 |
|---|
| End bp | 887580 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640124686 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055829 |
|---|
| Protein GI | 126459551 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1325] Predicted exosome subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTGCC CCATTTCGCT TCTCTACGCT AGGGCCTATG TACACGCCAC CGAGAGCATG
GAAAGCGTGT TAAAAGCACT GGAGTCTGTG GCACGCGGCA GGCCAGTCGT CAAAAGCGTA
CAGGGGCACC ACGGCAACCC GATACACATA GTTGAGGTGA AGTTGGAAGA CTGCGAGGCG
TTAGACGCCT TGAAGTCTCT GCTGTCTAGG CTAGACGACG TCGAGTTTCA ACTCCTGCTC
TCAGGCATCG ACGAGGGGAG ACTCTACGCC AAGTTTGACA AACAGCGCGC CTATAGGGGC
GTCTTAAGAG TGTCGCACGG CGACGATGTA ATTCACCTAG AGGTAAGGGC GAGGACCCTC
CTTGTGCCCG ACTTGAGGCA GTTCTTAGAA TCTCTGAGGG CTCAGGAGAA GCGTTAA
|
|---|
| Protein sequence | MNCPISLLYA RAYVHATESM ESVLKALESV ARGRPVVKSV QGHHGNPIHI VEVKLEDCEA
LDALKSLLSR LDDVEFQLLL SGIDEGRLYA KFDKQRAYRG VLRVSHGDDV IHLEVRARTL
LVPDLRQFLE SLRAQEKR
|
|---|
| |