Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0808 |
Symbol | |
ID | 4910186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 773618 |
End bp | 774226 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640124557 |
Product | hexulose-6-phosphate isomerase |
Protein accession | YP_001055700 |
Protein GI | 126459422 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
TIGRFAM ID | [TIGR03127] 6-phospho 3-hexuloisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACAT ATTTTAAACA GGCGTATATA GAAATTTCGA CTTTTATCGC GAAGGCTCTT GAAAAGCTTA ACTTGGAAGA AGTTGAAAAA TTTGTAAAAT CGCTAGAAGA CGCGTACAAG ACGAATAAGA AGATTCTTGT TGTCGGCGTC GGCAGAAGCG GCCTCGTAGG CCGCGCCTTC GCCATGAGGC TACGCCACCT GGGGGCCAGG TCCTACGTAA TAGGCGAGAC TATTACGCCG TCTGTAGAAG AGGGCGACTT AGTGGTCGCC ATATCTGGTA GCGGAGCTAC ACAGATAATA GTAGCAGTGG CAGAGGCAGC CAAGAAGATG AAGGCAAAGG TTGTAGCTGT GACCTCCTAC TACGACTCGC CGCTGGCACG CCTCGCCGAC TTAGTCGTCT ATGTGCCAGG TAGAACAAAG CTGGCCTCAA TGGACGACTA CTTCGCGAGA CAAATCCTCG GAATCCACGA GCCGCTGTCC CCCCTCGGCA CCCTCTTCGA AGACACCGCA ATGGTCTTCC TCGACGCAGT CATAGCAGAG CTCATGAAGC GGCTAGGCAA AAACGAAAGC GAAATGGCAA AACGGCACGC CAACATAGAA ATTCCCTAA
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Protein sequence | MVTYFKQAYI EISTFIAKAL EKLNLEEVEK FVKSLEDAYK TNKKILVVGV GRSGLVGRAF AMRLRHLGAR SYVIGETITP SVEEGDLVVA ISGSGATQII VAVAEAAKKM KAKVVAVTSY YDSPLARLAD LVVYVPGRTK LASMDDYFAR QILGIHEPLS PLGTLFEDTA MVFLDAVIAE LMKRLGKNES EMAKRHANIE IP
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