Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0558 |
Symbol | |
ID | 4908780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 529659 |
End bp | 530504 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640124305 |
Product | TM helix repeat-containing protein |
Protein accession | YP_001055451 |
Protein GI | 126459173 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTAC AGTTCGGAAT TGACTGGAAC CAGTTATTGC AAAACGCTAT TTACTACGGA GTGCAAGCCC TTATTGCTAT AGGTATAATT GTAATTGCGT GGGTTGTGGG GATTATATTG GGGAAGGCGG TTAATCGGCT TGTGGAAAGG ACGGGGCTTG AGAAGGCTTT TGACAAGACT GATGTGGGTA AGGCGTTTAG GGCTGCTGGT GTAGATTTGT CGAATTTGGT GGGCATGTTG GTGACCGCTT TTGTTATTGT GATTGGTATT GTGATTGCAT TGGATTATCT TAAGATTGGA GGAGAGGCGG GCAGAATTGT CGCAGATGTG GCTAGGTATT TGCCTAGGCT GATTGGCGGC ATTATTCTGC TGAGCGTTGG CATAATTCTC GTTGCCATTC TTACTGACTA TATTGGGAAG TTGCTTACTG GCTTGTTCCC CCAGCAGTTT GTGGAGATTG GGGAGATGTT GAGGAACTTG TTGCTGATCG GCCTCGTGGC GTTGATCGTC TCTATCGCGC TGGACTTGAT GCTGTTTACT GGTCCGCTTG TCTACCCGCT TATTCTTGGC ACCGTCATTA TTGGCGCTGG GATATTCATT GGGCACACTA TTGTGCGTAA CATCGTGGAG GATCACCCAG AGTTCGCTGG GGTGGCTCCG TATGCCAAGT TCTTGGTGTA CTTAGTGTTT CTGATGGTGG GTCTTGGGGC TATATTTGCC GAGTTTCCGC AGACCGCGCA CGTTGTTCAG AACGTTGCCT GGGGCGTGGC TATTGCGGTG GGCATATTGC TGGCGCCGGT GATATACACG TTGGCTAAGC GAATGGTAGA GGAGGCCAAG AAGTAA
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Protein sequence | MLLQFGIDWN QLLQNAIYYG VQALIAIGII VIAWVVGIIL GKAVNRLVER TGLEKAFDKT DVGKAFRAAG VDLSNLVGML VTAFVIVIGI VIALDYLKIG GEAGRIVADV ARYLPRLIGG IILLSVGIIL VAILTDYIGK LLTGLFPQQF VEIGEMLRNL LLIGLVALIV SIALDLMLFT GPLVYPLILG TVIIGAGIFI GHTIVRNIVE DHPEFAGVAP YAKFLVYLVF LMVGLGAIFA EFPQTAHVVQ NVAWGVAIAV GILLAPVIYT LAKRMVEEAK K
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