| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0379 |
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| Symbol | |
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| ID | 4909248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 364333 |
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| End bp | 365259 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124131 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001055280 |
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| Protein GI | 126459002 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.768095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTCC TCTTCGGCTT CGGAGGTGTG GGCAGGACGC TGGCCCAGCA GATATACCAA
AGGACGAGGC TCAAGATAGT TGCTGTGTTT GACTCAAGCG GCGGAGTCTA CAAACGCGGC
GGCTTTACAA GTGAGGAGGT GGAGAAGCTC GTGTCCCTCC CCCGTGGGTC CCTCGTCAAG
GCCCCAGTGG GCGAGAAGGT GGACATAGAC CACGCACTAG ACGAGGCAGA GATTGTCGTG
GATGTGAGCC CTCCCAACTA CGAGACGGGG GAACCGGCCT ACACGCTCTA CAAAAAGGCG
CTGCAAAAGG GGAAGGCTGT GGTCACGGCA AATAAGGCCC CACTCGCCCT CCACTTTGAC
GAACTCAGAG ACGGGGTCTA CTACAAGGCC ACGGTAATGG CGGGGACTCC CCTCGTCGAT
CTTCTAAAGG GCCTTGAGCC GCAGCGGGTG GAGAGCTTCA TGGGTATACT AAACGGGAGC
ACTAACTACA TTTTGACGCG TGTCTATAAG GACGGCGTGT CCTTCGAGGC CGCTTTGGGA
GAGGCGCGGA CTAAGGGCAT ACTTGAGCCA GACCCCAGGC TAGACCTCGA GGGGGTGGAC
GCCGCGGCAA AGCTGGTAAT CGTTGCGAAC ACCCTAGGTG TCTCTCTCAA GCTGGGCCAA
GTGGCCCGCG AACCCCTAAC GCCGATGGGG CCGGTGACAA AATACGTAGC ATACCTCGAC
GTTGGTGCAC AGAGGGGAGA GGTAAAGCCT GTGAGACTAG ACCCAGCCCA TCCACTGGCA
AATGTGGACT ATACACTAAA CGCGGCGTAT ATAAAGACTG AGGTCAACGA CATCTATCTG
GTGGGTAAAG GCGCTGGACG CCTAGAAACA AGCCTAGCAC TGCTTAACGA CATACTAAGC
TTCTACAAGA CTCTAAGGGG CAAGTGA
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| Protein sequence | MILLFGFGGV GRTLAQQIYQ RTRLKIVAVF DSSGGVYKRG GFTSEEVEKL VSLPRGSLVK
APVGEKVDID HALDEAEIVV DVSPPNYETG EPAYTLYKKA LQKGKAVVTA NKAPLALHFD
ELRDGVYYKA TVMAGTPLVD LLKGLEPQRV ESFMGILNGS TNYILTRVYK DGVSFEAALG
EARTKGILEP DPRLDLEGVD AAAKLVIVAN TLGVSLKLGQ VAREPLTPMG PVTKYVAYLD
VGAQRGEVKP VRLDPAHPLA NVDYTLNAAY IKTEVNDIYL VGKGAGRLET SLALLNDILS
FYKTLRGK
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