| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0346 |
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| Symbol | |
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| ID | 4909147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 330448 |
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| End bp | 331389 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640124098 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001055247 |
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| Protein GI | 126458969 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGGA CTGTTTTGCT GTATGCAAAT GGCACAGTCC TCCTGTTGCT CAACGCCACC
TTAGCCGGGG TTGTGGCCAA CGTCTCTCTC CCGGCGTCTC CCCTCGCCAA GCCCTACGTC
GCCCTCGACG GGGTGCCTGT GCCCTTCCTC TTCGAGGGGG ACAGAGTCGT GGTGCCTCTG
GGGGGCGGGG GCGTGGTGAC AGTCAAGTAC GTGCCCAGGC TCGGGGAGCT GGACGGCTTT
CTCTACTTCA ACCTAACTAC GCCCGACCTC TTCGTGATAT GGGCCGAGGC TGGCGTCTTG
GCCCTCCCTC GCCTAACCGT GCTGAATTTC ACCAAGGTGG GTAACGACGT GATTATAGTG
GCCAAGGGCC CCGGCGCCCT AGCCTACGCC AAGGTGTCAA ATGTCACACG GCCCCCGGCA
TCCACGCCGC AGAGCACCCC AACGTCTACG CCCCCCAGCC CCGCCCCAGC TACTGCGCAG
AGCATCACGC CGGCCCTCCC CGCCACAACA ACGACGACGC CTGTTGTAAA TGTGCCGCAC
ACTCAAGCAT CCACGGCGTC CCCCTCAAGC GTGGTATCGC CGACTGCCGC GGCCCCGCCT
ATAGCGACCC CCGCCGGGCC TATCTCAACG GGTAGCCCCT CGCCCAGCGG CCAGCTTTTG
CTGGCAATTG GCGTGGCCGC CGCCCTGGCG GCTCTGGCCG CCGTCTTTGT CAAAGGGAGA
CGCGGCGGTG GGGGTGGCGC TACTGTGGGC GGCCTCTCTG AGGTAGATGA GAGAATTTTG
GCTTATCTGA GGGAGAGGGG CGGCGCCTAT GAGTCTGAGA TTGCCAGAGA CTTGGGCATT
CCGCGTACCA CTGTGTTTAG GGCTGTGCGG CGGCTGGAAG AGGCGGGTCT CGTCATCGTG
GAGAAGAGAG GCGGCAGGAA TTTTGTTAGA AGAGTTGGCT GA
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| Protein sequence | MLWTVLLYAN GTVLLLLNAT LAGVVANVSL PASPLAKPYV ALDGVPVPFL FEGDRVVVPL
GGGGVVTVKY VPRLGELDGF LYFNLTTPDL FVIWAEAGVL ALPRLTVLNF TKVGNDVIIV
AKGPGALAYA KVSNVTRPPA STPQSTPTST PPSPAPATAQ SITPALPATT TTTPVVNVPH
TQASTASPSS VVSPTAAAPP IATPAGPIST GSPSPSGQLL LAIGVAAALA ALAAVFVKGR
RGGGGGATVG GLSEVDERIL AYLRERGGAY ESEIARDLGI PRTTVFRAVR RLEEAGLVIV
EKRGGRNFVR RVG
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