| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0144 |
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| Symbol | |
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| ID | 4908274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 139209 |
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| End bp | 140462 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640123895 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_001055048 |
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| Protein GI | 126458770 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAC GCGTCAGAGT GGTGCTGGAA GGCGGAGACG TCTTTGAAGG CGTCCTTCTG
CCCCCTACCC AGTTCAGCGA CCCAGATGTA GTTGTCGTGA AGCTGAGGAA TGGGTACAAC
GTGGGGATTA AGAGGAGTAG GATTAGGGAG CTTGTGGAGC TGGGGGATGT GCCGCCCCCG
TCTTTTGGCG CAGCTGAGCC GCCTAAGCAG GTGGGGCCTG GTGTCTGGGT CTTGGCGGCT
GGCGGGACAA TTCTCTCCCG CGTGGACTAC GTTACGGGGG GCGTGTACCC CACTCTGTCG
GCGTCTTACC TTTTCGAGCT GTTGGGCGAA GTGGAGTCGC CTGTGGAGCT CGTGGAGGTC
ACCGCCAAGT TTAGCGAAGA CTTCACCCCG GCCACGTGGT CTCTAATAGC GGCGAAAGTA
GGCGAGGCCT TTGAAAAAGG CGCCAGGGGG GTTGTCGTCT TGCACGGCAC AGACACTATG
CACTACACGG CTGCGGCCCT CGCCTTTGCC TTTAGAGAGG CGCCGGGGCC AATTGCGCTT
GTGGGCGCCC AGAGGTCGAG CGACAGGCCT TCCACAGACG CGGTGCTTAA CCTCAAGGCG
GCGGTCGCCG TCGCCGCCAG GGCCCCCTTT GCCGAGTCTG TCGTAGTTAT GCACAAGACG
AGTAGTGACA GCGTGATAGC GGCTCACAGG GGCACTCGGG TGAGGAAGAT GCACACGTCG
CGGAGAGACG CCTTCCAGTC CATAAACGCC CAGCCGCTGG CCGAGTACTA CCCCGAGAAA
GACTTGTTGC AGGTACTAGA GCCGCAGTAC AAGGAGAGGG GCGGCCTCTC CTACACCACG
AAGTTCGAAG AGGCTGTGGC CCTGGTCAAG TTCTTCCCCG GGATGTACCC CAAGATGTTG
GAGGCCCTCC TCGACTTGGG GATAAAGGGG GTGGTTATCG AGGGGACGGG GTTTGGCCAC
GTGGGGGAGT ACCTACTCCC CGCGGTGAAG AAGCTGACAG ACGCGGGGGT GGTGGTGGCC
ATGGCCAGTC AGACCTTGTA CGGCAGAGTA AACCTCTACG TCTACCGCAG GGGGAGAGAG
CTGTTGGCCG CTGGGGTGGT GCCAGTGGAG GACATGTTGC CTGAGGTGGC CTACGCCAAG
CTCTCCTGGG CCCTCGCCAA CTTCAAGCGC GAGGAGGTGC CGCAGGTGCT TAAGACCCCC
GTGGCGTTTG AGATAAACCC GCGGTCAGAC CCCCTGGCCT TTGGGGCGCC ATGA
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| Protein sequence | MYKRVRVVLE GGDVFEGVLL PPTQFSDPDV VVVKLRNGYN VGIKRSRIRE LVELGDVPPP
SFGAAEPPKQ VGPGVWVLAA GGTILSRVDY VTGGVYPTLS ASYLFELLGE VESPVELVEV
TAKFSEDFTP ATWSLIAAKV GEAFEKGARG VVVLHGTDTM HYTAAALAFA FREAPGPIAL
VGAQRSSDRP STDAVLNLKA AVAVAARAPF AESVVVMHKT SSDSVIAAHR GTRVRKMHTS
RRDAFQSINA QPLAEYYPEK DLLQVLEPQY KERGGLSYTT KFEEAVALVK FFPGMYPKML
EALLDLGIKG VVIEGTGFGH VGEYLLPAVK KLTDAGVVVA MASQTLYGRV NLYVYRRGRE
LLAAGVVPVE DMLPEVAYAK LSWALANFKR EEVPQVLKTP VAFEINPRSD PLAFGAP
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