| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0132 |
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| Symbol | |
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| ID | 4908747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 128171 |
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| End bp | 129835 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640123883 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001055036 |
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| Protein GI | 126458758 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTAAGT TCGACGTTGT GTTTCTCCAC GCCCCCAGCG TTTATGATTT TAGGAAAACT
GCGAAGGTGT ACGGGCCTAT AGCCGACGTA ATACCCTCAA CTCCCGTGTT TGACATGTAT
CCAATAGGTT TTTTCTCGCT GGCATCGTAC TTGAGTTCTA GTGGGTATAA GATTGGCATA
GTCAACCTCG CCGCCAGGAT GTTATTGGAC AAAGACTTTG ACGTAGAACG CGCGGTTAAG
GGGATTGAGG CCGAGATTTT TGCAATAGAC CTCCACTGGC TGGTCCACTC GCACGGAGCT
ATTGAAGTAG CTAAGCTGGT GAAGAAGTAC CACCCAAACT CGGCCGTAGT CTTCGGAGGC
CTCTCCGCGA CGATATACTA CGAGGAAGTT CTATCACGTT ACAGACAAAT TGACTACGTA
GTTCTTGGAG ATACGGTTGA AGTACCGTTT AAGATGTTAG TAGAGCATCT GCTAGATAGT
AGGAGGGGTC TGGAAGAAGT TCCAAATTTA GCTTGGCGGG ATAGAGAGGC CGTGAAGACC
ACGGGGATTA AGTTCGTCCC TAAAAGCCTA GATGAATACG CAGTAGACTA CGGCGAGGTT
CTCAAAATAG CCGCAAGAGG AGGCGCCCTC TCGGCAATTC CCTTCGCCGG ATTTTTGAAA
GAGCCTATAG GCGCAGTGCT GAGCTACAAG GGCTGTATCT TAAACTGCGC AACTTGTGGA
GGTAGCCTTT GTGCATACGC TAGTTACTTC TCTAGGACGT ACCTAGGCGT GAAGAAGCCT
GAGACTCTAG TAAATGAGGT AAAGAGCATA GAACAGTACT TGAGAGTGCC CATATTCGTA
GTTGGAGATC TCCAGCCCTT GGGCGTTAAG TGGATTGAAA AATTTGTCGA GGGTTTGAGA
AGAGAGAGAT TCTCCAGCGA AATAATTTTT GAATTCTTCA CCCCACCCCC ACTCAACGTC
TTGAAACTTC TCTCAAAGGC CTCAGACAGC GTGTATCTAC AGATTTCCCC TGAGACGCAG
GACGAATTAC TGAGGTTGAA GTTCGGCAGG CCATACGACA ATAGCTCACT GGAGACCTTT
ATCAAAAGGA CTCTATCGCT CGGATTTGCC AGGCTAGATC TCTACTTCAT GGTAGGCATA
CCCGCCCAAA CCCTCGACTC TGTCCTTGCC ATGCCGAACT ACGTTAGAAA ACTCTACGGG
CTACTGCCAA GACCTCAGAG GCATAGGCTA GACGTCTTTG TGTCGCCGCT TGCCCCCTTC
ATAGACCCTG GAAGTAGGGC CTTTGAAAAC CCCCGCGCCT TCGGGTACAG GCTGAGGGCT
AGGACTCTTG AAGAGCATAG GAGGCTGTTG GAATTCTCTA GAGACTGGGT TGAGATGTTG
AACTACGAGT CTGACCACAT TAGTAGAAGC GAGATAGCCT ACGCCGTATA CCAAACAGCA
AGAGAGTTTG TAAAAATTAA GGCAGAAAAC GGCGTAATTT CATGGGATCA AGCTAAAGAG
ACTCTAGAGA GGATGGAAAT GCAACGTAAC GGCGCTTTTG TCAGAAGCAC CATAGATCTT
TACCCAAGTA GAAGACTCCT GAGGTCTGTT AGATGGAAGT TGATAAGCTT GATGGGCTTT
AGAGGGCTAG TATCTATTGC AAGAGACCTA GCGCCTCTTA TTTAA
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| Protein sequence | MPKFDVVFLH APSVYDFRKT AKVYGPIADV IPSTPVFDMY PIGFFSLASY LSSSGYKIGI
VNLAARMLLD KDFDVERAVK GIEAEIFAID LHWLVHSHGA IEVAKLVKKY HPNSAVVFGG
LSATIYYEEV LSRYRQIDYV VLGDTVEVPF KMLVEHLLDS RRGLEEVPNL AWRDREAVKT
TGIKFVPKSL DEYAVDYGEV LKIAARGGAL SAIPFAGFLK EPIGAVLSYK GCILNCATCG
GSLCAYASYF SRTYLGVKKP ETLVNEVKSI EQYLRVPIFV VGDLQPLGVK WIEKFVEGLR
RERFSSEIIF EFFTPPPLNV LKLLSKASDS VYLQISPETQ DELLRLKFGR PYDNSSLETF
IKRTLSLGFA RLDLYFMVGI PAQTLDSVLA MPNYVRKLYG LLPRPQRHRL DVFVSPLAPF
IDPGSRAFEN PRAFGYRLRA RTLEEHRRLL EFSRDWVEML NYESDHISRS EIAYAVYQTA
REFVKIKAEN GVISWDQAKE TLERMEMQRN GAFVRSTIDL YPSRRLLRSV RWKLISLMGF
RGLVSIARDL APLI
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