Gene Patl_3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3841 
Symbol 
ID4175621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4636821 
End bp4637291 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content43% 
IMG OID638056869 
ProductFerritin and Dps 
Protein accessionYP_663395 
Protein GI109900140 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000127863 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGA TCGATATTGG TATCAATGAA ACAAACAGAG TAAAAATTGC TGATGGACTA 
AAGGCTTTAT TAGCGGATTC TTACACTCTG TATCTACAAA CTCATAATTT TCACTGGAAC 
GTCACAGGCC CTCAGTTTCG CGAGCTACAT TTGATGTTCG AAGAGCAATA CACAGAATTA 
GCAACAGCTG TCGATGATAT CGCCGAGCGT ATTCGTACAC TGGATGTCGC AGCCCCTGGC 
ACATATAAAG AATTTGCCAA GCTAAGTTCT ATTAAAGAAG TGGATGGTGT ACCTGAAGCA 
TCAGAGATGA TTGATTTACT GACTAAAGGT CATGAGCAAG TCGTGAGAAC GTCTCGTGAA 
GTATTGAAGC TGGCTCAAGA TGCTGAAGAC GAATCAACAG CCGCCCTAGT GTCTGATCGC 
ATGCGAATTC ATGAGAAAAC ATCTTGGATG TTACGCGCGA CTCGTAAGTA A
 
Protein sequence
MTTIDIGINE TNRVKIADGL KALLADSYTL YLQTHNFHWN VTGPQFRELH LMFEEQYTEL 
ATAVDDIAER IRTLDVAAPG TYKEFAKLSS IKEVDGVPEA SEMIDLLTKG HEQVVRTSRE 
VLKLAQDAED ESTAALVSDR MRIHEKTSWM LRATRK