Gene Patl_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3771 
Symbol 
ID4175551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4541892 
End bp4542488 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content46% 
IMG OID638056799 
ProductTetR family transcriptional regulator 
Protein accessionYP_663325 
Protein GI109900070 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.179625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGCA AAGCAGCGAA AAAGTCCACT AGAATGCGCT TATTAGAAGC GGCTAGGGTT 
GAAATTGTTA TCGGCAATGG GGATTTAGAC GTTGCGAATG TAGCCAAACG GGCAGGGGTC 
TCTGACGGAC TGACATACTA TCATTTCGGT AATAAAGCTG GGCTTATCAA CGCCATCGTA 
AATGAATTTT ACCACGATTT TGACGACAAA GTTGCAGGTG TCCCCTTTGA TGGTGACACT 
TGGAAAGAGA GAGAAAAAGC ACGGGTTCAT GCCATGGTCT CGTTATTTTA TGATGATCCC 
GTTGCAATGA TTGCAGCAAC GCGGCTACGA ACCGACCCTG CGTTTACCAA AGAAGAATGG 
CAGCGCAATG ACAGGCTAGA GCAATTAGGC GCAAGAAACA TCGCCGATGC ACAGCGCAAA 
GGCGAAATCG ATGAAACGTA CAACCCATTA ATGTTAGCGT CAATGCTGCT TTCTGGTGTG 
ATGTCAGGTG TTAGAATTGC ACTCACCACC AAACCCCCTC TGCCAGTTGC TACAGCCCAA 
CAATCAGTAT GGGGATTTGT CGAACGAGCT GCTGGTATCA AAGATATAGA TTTATAA
 
Protein sequence
MEGKAAKKST RMRLLEAARV EIVIGNGDLD VANVAKRAGV SDGLTYYHFG NKAGLINAIV 
NEFYHDFDDK VAGVPFDGDT WKEREKARVH AMVSLFYDDP VAMIAATRLR TDPAFTKEEW 
QRNDRLEQLG ARNIADAQRK GEIDETYNPL MLASMLLSGV MSGVRIALTT KPPLPVATAQ 
QSVWGFVERA AGIKDIDL