| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3456 |
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| Symbol | |
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| ID | 4175233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4147128 |
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| End bp | 4148921 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056483 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_663012 |
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| Protein GI | 109899757 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG CATTCATATT ACGTGATTAC CAAACGCAAG CGGTTGATGC CGCCCTAGCG
CATTTTCGGC AAAGCGATGA CCCCGCAGTG ATTGTATTGC CGACGGGGGC AGGCAAAAGT
TTGGTTATTG CCGAGTTGAG TCGATTAGCA AAAGGCCGTG TTATCTGCCT TGCTCATGTC
AAAGAGTTAG TGGAGCAAAA TCACGCTAAG TTTCTTGCTA CCGGCTCGTC GGCAGGACTC
TTTTCAGCTG GCTTAGGCCA AAAAGACAGC AACCTGAAAA CGACCTTCGC TAGTATTCAG
TCGCTGTCTG CAAACTTAGA GGCTTTTGAC GCTCCTGCTA GCTTAATTAT TATTGATGAA
TGTCACCGAG TAGGGCTAGC AGACAGCGCT CAATACAATA AAACCCTGGA ACATTTTCGC
CGTTTAAATC CAAAGGTAAA AATGCTTGGC TTAACCGCTA CTCCTTATCG ACTAGGCAGT
GGTTGGATTT ATCAGCATCA CTACCATGGT TATACACGGC CCTCAGCCCA ATCTTTTTTC
AAAAAATGTA TTTTTGAGCT TCCTTTGCAA TACATGGTCA AAAACCATTA TTTAACGCCG
CCCATTCATT ATGATGCCGC CGTTGCTCAT TATGATTTTA GTTTGCTAAC AGAAAGTTTG
GACGGCGAGC AAAATACCGA TGACATCGCA TTAAATGAAC TCATTGATAA ACACCCTAGA
GTGACTAAGG CCGTGACCGA GCAAATACTA CAGCTTAGTC AGGACCGCCA AGGCGTCATG
ATTTTTGCCG CCACTATCGA TCACGCAAAA GAAATTTGCG GTTACTTACC CCCACAGCAA
ACCGCCTTAA TCACCGGCAC CACAAAAATA AAGCAACGTG ACACGCTCAT CGCTGCCTTT
AAAGCTAAAC ACATTAAGTA CTTAGTGAAT GTATCTGTAT TAACCACAGG CTTTGATGCG
CCCCACGTAG ACGTGATTGC CATTTTGCGG CCCACACAAT CGATCAGTTT ATTTCAACAA
ATTGTCGGGC GCGGCTTGCG CCTAAGCCCA GGCAAAAAGG ACTGCTTAGT GTTGGATTAC
ACCAATAATG GTTACGATAT TTTTCAGCCT GAAATTGGCG AAAAAAAGCC AACGCCAGAT
TCTGTTGCCG TGCAAGTACA TTGCCCACAA TGCGGTTTTG CTAATGCATT TTGGGGGAGA
AAAGACGCAG AGGGTCACAT ACTTGAGCAT TTTGGTCGCC GCTGCCAAGG CTTGATTGAA
AGCCCTGACG CCTCTGATAG CCCAAACACC GTCGATGGCC CACAACTCAC AATGCAATGC
AGCTATCGCT TTCGCTTTAA ACACTGCCCC TATTGCAATC AGGAGAACGA CATTGCTGCC
AGACAATGCC ATCACTGCAA TGAGAAGCTC ATCGACCCTG ACGACATATT GAGAAAGGCG
TTAAATTTAA ATAATAATAA AGTGCTACGC TGCGCCGCCA TAACGCCTGT GATCAACCAG
GCGGACAAGA GCATAAAAAT CACCTACCAC GATGAAGATG GTCTAACACT ATCAGAAACC
TTTCGCTTCA ATTATAAAAA AGCGCGACAA CGCTTTAATG ATTTATTCGC CCGAAGATTA
GCCAGCGCCA CCCAGTCAAT TCATTTCGAA TCCATTGAAG AGTTGCAACC GTTTTTGCCC
TATCTACCAA CACCTGACTT TGTGATCGCC AAAAAGCAAA AACACCACTG GCAAGTCACC
GAACGATTAT TTGATTACCA AGGGCCATAT CGCAAGGCCA ATGCCCTTGG CTAG
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| Protein sequence | MSQAFILRDY QTQAVDAALA HFRQSDDPAV IVLPTGAGKS LVIAELSRLA KGRVICLAHV
KELVEQNHAK FLATGSSAGL FSAGLGQKDS NLKTTFASIQ SLSANLEAFD APASLIIIDE
CHRVGLADSA QYNKTLEHFR RLNPKVKMLG LTATPYRLGS GWIYQHHYHG YTRPSAQSFF
KKCIFELPLQ YMVKNHYLTP PIHYDAAVAH YDFSLLTESL DGEQNTDDIA LNELIDKHPR
VTKAVTEQIL QLSQDRQGVM IFAATIDHAK EICGYLPPQQ TALITGTTKI KQRDTLIAAF
KAKHIKYLVN VSVLTTGFDA PHVDVIAILR PTQSISLFQQ IVGRGLRLSP GKKDCLVLDY
TNNGYDIFQP EIGEKKPTPD SVAVQVHCPQ CGFANAFWGR KDAEGHILEH FGRRCQGLIE
SPDASDSPNT VDGPQLTMQC SYRFRFKHCP YCNQENDIAA RQCHHCNEKL IDPDDILRKA
LNLNNNKVLR CAAITPVINQ ADKSIKITYH DEDGLTLSET FRFNYKKARQ RFNDLFARRL
ASATQSIHFE SIEELQPFLP YLPTPDFVIA KKQKHHWQVT ERLFDYQGPY RKANALG
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