| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3443 |
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| Symbol | |
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| ID | 4175220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4132144 |
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| End bp | 4135842 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056474 |
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| Product | SMC protein-like |
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| Protein accession | YP_663003 |
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| Protein GI | 109899748 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAC TTAGCCTGCA ATTTAGCAAC CTCAACTCAT TAAAAGGCCA ATGGAAAATA
GACTTTCGCC AAGCGCCTTT TGCCGATAAC GGTGTGTTCG CTATCACGGG CCCTACTGGG
GCAGGCAAAA CCACCTTGCT GGATGCCATC TGCTTAGCGC TCTACCATGA AACCCCGCGC
TTAGGGGCGC TGTCGGCCAA TAACAACGAG ATCATGACCC GAGGCACAGC CGAGTGCAGT
GCCGAAGTTG AGTTTGAAGT AAAAGGCATG GCCTATCGCG CCTTTTGGAG TATGCGCCGC
TCACACGGCA AGCCAGACGG TAAGCTGCAA GCGGCGGTGG TGGAGCTAGG GGACGTTGCC
TCAGAAAAAG TGCTGGCTAG CCAAATTAAG AAAAAGTCAG AGCTGATAGA GCAAATCACC
GGGCTTGATT TTGGTCGTTT TACTAAATCC ATGATGCTCT CTCAAGGGGA GTTTGCGGCG
TTTTTAAATG CCGATGAAAA GCAGCGCGCC GAGCTATTAG AAGAACTCAC AGGCACTGAA
ATTTACGGCT TGATCTCTGA ACGCGTACAC CAACATTACA GCCAAGCGAA ACAACAGTTA
GCCGAGCTTG AAGCCCAAGC CAAAGGGGTA CAGTTGCTCA GCGAAGATCA AAAGCAAGCC
TTAATGGATG AACAGCAAGA CTTACAAGGG CAGCAAAAAG AGCGCCAAAT ACACATAAGT
GCTAAACAAG AGCATGTGAA CTGGTGGCAA CAACTTGACT CCGCTCAAAG TGCACAACAG
CAAGCCACAC TGCAGCTGAC CCAAGCTCAA CACGAAAAAG AGCAGCAAAA AGAGGCCTTA
CAACGACTGG CCAACAGCCA CCCGAGTGAA GCGCTGCGAG CGCCGTTTGA GTTATTAACC
GACGCTCAAG CCCAGTGCAT TAACGACGAA AAGGCCTTGG GTCAAAGCCA GCAGCAACTG
CAAACAAGTG ACGCTAGCTT AGCGCAAAGT AAAACCGTAA GTGTGGCAGT GAGTAATGAA
TTTCAGGCAA TCAAAGCGAC ATACCACGCA CAAGAAACCT TGCTCAACGA AGAGGTTATT
CCCCTAGATA ACGAAATACG TCAACACCAG GACCAGCTCA CCCAAACCAA CGCGCAACAC
GCTCAGTTGA GTACAAAGCA TGCACAGCTT GTGCAAGATG TTGAAAACAC CCAGACGGGG
ATTAATAGTC AGCAGCAATC GTTAAAACAA GCCAATGACT ACTTAACCGC TCGTCCCTCT
GATGAAGCAC TGAAACAGTA TTTAGGTCAA TGGCAGTTGC AAGCGCAACA AATCAAAAAA
GAACAAACGA GTTATCAGCA ACTGGCTGAA AAGTGTAAAC AGGAACAAAG GCAATTACAC
CTAGCCCAGC AAGACGCTCA GCTTAACCAG CAGCAACATG AAAAAATCAA TCAACAAACC
CGTGAATTGG AAAACGAGTT TCAGCAACAA ACCGAGCGTT TATCTAAGCT TGAAGAGCAT
GGCGCGATTG ACCCCCAAGA GCGGCAGCTC AGTACATTAC AAAGCTTAAC GCCGTCACTA
TTGGCGTTAA AAAACACTCA GCAACAATGG CAACAGCAAA CCCAAGAGCT AACCGAAAAA
CAGACTCAGC TCGCTGATAA CCTAGCGCAA CAAAAAAACC TGAGCAATGA ACGAGAAGTT
ATAAAACGTC AGTATTTGGC AAAAAGCCAG CAAGTGAAAC TGCTTAGCCA ACTTATCAGC
CAAGAAGAGC AGTTAATTCA CTTTCGCGCA GCCCTAAAAG ATGAACACCC CTGCCCTTTG
TGCGGCGCCA AAGAGCACCC GCTGACATCT GAAATGGCGG TGGATATTCC TGATACCGTT
ACGCAAAAAC AACAACAGGA AAGCGAACTG GCTCAGTTAG AAGAGCAAGG TAAAGAAATA
CGCGCAAAAC TAGATGCCTT CCTGCGCGGT GAAACCGAGC TGAGACAACG TATCGATTGG
CTCAGTACCC AACAAGCACA ATTAAGCCAA ACATGGCCTG AGATGTGCCA AGCCCTAAGC
CCGTTATCTG ATCAACAAAC TAACCTGCAA CTTACTATTG ATAATGCTGA CTCGCTTATT
GCCATTGAAA ATCAATTTAA CCAGCAAATT CAGCAGTTAC AAAAGCAGAT AGAAAAGTTA
AAAACGCAAG CTCGCACTTT GTTAGTCAGC AAGGAAAAAT GGCAACACAG TCAAAGCCAG
AGTCAAAGTG CCAGCTCAGC CTTATTGCTG GCGCAGCAGT CAGCGAAAAA CCTAGAAAAC
AGTGCGCAAA ATCTTAGCAA CGATATACAA CAGGCCGGTG AGACATTAAC TTCATTGAGC
CAAAGCTTGT TAACGCATAT TCAGCAACAC GGCTATACAC CACCCGAGGC AGATAATCTG
CTTCAATGGC TAACGAGCAA AGAACAAGAC GCCAAGCAGT GGGAACACCA CGACAATCAG
CGCAATGAGG CGACGGTGCA AATAGACAAA CTCACCAGCG CCCAGCAACA TCAGCTTAGC
CTATCAGGCG ACACCAAGAG TCAGCTAACC GCTATTGAGC AGCAACGCCA AACGTTACGC
GCACAACTTG AGAGCCTAAG TACTAAACGC TTTAGCTTGT TTGCTGATAA GTCGGTTAAA
ACAGAGCGCG AGACATTAAG CGAAACGCTG CGCACTTTAG AAGCGCGCCA CGAACACGCT
CAGCAGCAAA TGCGCCAAAA AGAGCAGGAA CACAATACCC ATTTGGCTAA CGTACAAAAC
GCCCAAACCC AGTTGCAACA AAACCAAACC CGCCTCAAAA CGCGGCAAAA CGAATGGCAA
ACCAAGCTCC TAGCCAGCCC CTTTGCCGAC CAGCAAGCCT TTGAAGCCGC CTTACTTGAT
GAAGCCACCC GTGCGACATT ACAAACACTC AAACAAACCT TGGATGACAA CCTAGCAAAA
TATCAGGCTT TGCTTGAGCA AGCTAACACC CAAGTCAAAA CGCTGTTGGC ACACAACAAT
GCCACCCAGT GGCAACTACA AACGCGCGAT GCGGTTATTG AAGCCTTAAA TGCCCTGACT
GAAGAGCAAC ACAAGGGGAA CAAGCGTGAA GGTGAAATCA GCCAAGCGTT GAATTTCGAT
AAACAGCGCA GCAGCGAACA ACAAAGTCTA TTTAGCCAAA TTGAATTACA GCGAAATGAA
TTTGAACATA TTCATTACCT GCATTCGTTA ATTGGCTCGC AAAAAGGGGA TAAGTTTCGT
ACGTTTGCCC AAGGCCTCAC CCTTGATAAT TTGATGTACC TGGCCAATAA ACAACTAGAG
CGCTTGCACG GCCGATATTT ACTCAAGCGC AAAGCCGATG CCAGTTTAGC CCTAAGCGTG
ATTGATACCT GGCAAGGGGA TATTCAGCGC GACACTAAGA CCCTCAGCGG CGGCGAAAGC
TTCTTGGTCA GCCTAGCACT GGCACTGGCG CTATCAGAAC TGGTCAGTCA CAAGACCAGC
ATCGACTCTT TGTTTTTAGA CGAAGGTTTT GGCACCCTAG ACAGTGAAAC ACTGGATATT
GCCTTGGATG CACTGGATAA CCTGCACGCC TCGGGCAAAA TGATTGGGGT TATCAGTCAT
GTTGAAGCCA TGAAAGAGCG CATCGTAGCG CAATTGGCAG TGACCAAGAA AAGTGGATTA
GGGGTGAGTG AGTTGGATCA GCGGTACGCT GTGCGTTAA
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| Protein sequence | MKILSLQFSN LNSLKGQWKI DFRQAPFADN GVFAITGPTG AGKTTLLDAI CLALYHETPR
LGALSANNNE IMTRGTAECS AEVEFEVKGM AYRAFWSMRR SHGKPDGKLQ AAVVELGDVA
SEKVLASQIK KKSELIEQIT GLDFGRFTKS MMLSQGEFAA FLNADEKQRA ELLEELTGTE
IYGLISERVH QHYSQAKQQL AELEAQAKGV QLLSEDQKQA LMDEQQDLQG QQKERQIHIS
AKQEHVNWWQ QLDSAQSAQQ QATLQLTQAQ HEKEQQKEAL QRLANSHPSE ALRAPFELLT
DAQAQCINDE KALGQSQQQL QTSDASLAQS KTVSVAVSNE FQAIKATYHA QETLLNEEVI
PLDNEIRQHQ DQLTQTNAQH AQLSTKHAQL VQDVENTQTG INSQQQSLKQ ANDYLTARPS
DEALKQYLGQ WQLQAQQIKK EQTSYQQLAE KCKQEQRQLH LAQQDAQLNQ QQHEKINQQT
RELENEFQQQ TERLSKLEEH GAIDPQERQL STLQSLTPSL LALKNTQQQW QQQTQELTEK
QTQLADNLAQ QKNLSNEREV IKRQYLAKSQ QVKLLSQLIS QEEQLIHFRA ALKDEHPCPL
CGAKEHPLTS EMAVDIPDTV TQKQQQESEL AQLEEQGKEI RAKLDAFLRG ETELRQRIDW
LSTQQAQLSQ TWPEMCQALS PLSDQQTNLQ LTIDNADSLI AIENQFNQQI QQLQKQIEKL
KTQARTLLVS KEKWQHSQSQ SQSASSALLL AQQSAKNLEN SAQNLSNDIQ QAGETLTSLS
QSLLTHIQQH GYTPPEADNL LQWLTSKEQD AKQWEHHDNQ RNEATVQIDK LTSAQQHQLS
LSGDTKSQLT AIEQQRQTLR AQLESLSTKR FSLFADKSVK TERETLSETL RTLEARHEHA
QQQMRQKEQE HNTHLANVQN AQTQLQQNQT RLKTRQNEWQ TKLLASPFAD QQAFEAALLD
EATRATLQTL KQTLDDNLAK YQALLEQANT QVKTLLAHNN ATQWQLQTRD AVIEALNALT
EEQHKGNKRE GEISQALNFD KQRSSEQQSL FSQIELQRNE FEHIHYLHSL IGSQKGDKFR
TFAQGLTLDN LMYLANKQLE RLHGRYLLKR KADASLALSV IDTWQGDIQR DTKTLSGGES
FLVSLALALA LSELVSHKTS IDSLFLDEGF GTLDSETLDI ALDALDNLHA SGKMIGVISH
VEAMKERIVA QLAVTKKSGL GVSELDQRYA VR
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