Gene Patl_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3388 
Symbol 
ID4175165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4063537 
End bp4064274 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID638056419 
Producthypothetical protein 
Protein accessionYP_662948 
Protein GI109899693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAC GCCTAGTAAA ATCACTGCTG ATGGCCTCAA CATTTGGCGG ACTATCGCTT 
TCTGCCCATG CATTTGACGT AACGTATACC GCTCAAGCCC CTATTATTGA CGGACATTCA 
GAAAATGTTT GGCAACAAGC ACAATGGCAC GACATGCCAT ATTTAATGGA CGGCACCTTT 
CCAGAAAAAG CAGATTTTTC CGGCCGCTAC CGTCTGCTAT GGGATGAAAA CTACTTGTAC 
CTACAAGCCG AGATTACCGA CGACCTGCTG ATCGACACCC ATGCTGATCC CTTGGTGCAA 
TACTGGGATG ATGACGCCCT AGAAATATTT ATTGATGGTG ACGCATCAGG CGGTAATCAC 
CGCTTTAATC ACAGCGCATT GGCCTACCAC ATCGGCCTTG ATAACCAAGC AGCAGATATT 
GGCGACGATG AAAAGGCGCA TTTGTATAAC GAACATGTAA ACAGCACCTG GAAGCGCCAA 
TTAGATGCGC CCAACACAAT ATTGTGGGAA GTGGCCATCA AGCGCTATCC CAACAACTAC 
ACTGATGCCA ACCCTAAAGC GGCAATTCCC CTGAAGAGCG GCGATGTGAT GGGCTTTATG 
TTGGCTTACT GTGATAACGA TGGCAGCGAA GTTCGTGAGC ATTTTATGGG GTCTCATGAT 
TTTGCTGAGC AAAACGGTAG CAAAAACTTG GGTTTTATCA CCGCTGACGT CTTCGGTAAA 
ATCACATTGA AAAAGTAA
 
Protein sequence
MFSRLVKSLL MASTFGGLSL SAHAFDVTYT AQAPIIDGHS ENVWQQAQWH DMPYLMDGTF 
PEKADFSGRY RLLWDENYLY LQAEITDDLL IDTHADPLVQ YWDDDALEIF IDGDASGGNH 
RFNHSALAYH IGLDNQAADI GDDEKAHLYN EHVNSTWKRQ LDAPNTILWE VAIKRYPNNY 
TDANPKAAIP LKSGDVMGFM LAYCDNDGSE VREHFMGSHD FAEQNGSKNL GFITADVFGK 
ITLKK