| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3335 |
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| Symbol | |
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| ID | 4175112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4000685 |
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| End bp | 4002079 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056366 |
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| Product | histidine kinase |
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| Protein accession | YP_662895 |
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| Protein GI | 109899640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAC ATTTTGCAGA GCGCACACGC TTGAGCATTG ATAGCTTTAA GTCAGATGTA
CTAACAGCCT TGCTTGGTGA AACATCAAAT GCTGTACATA CCCTGGCGGC GTTATTGCAA
GAAACCTTGA ACAGCCAATA TCTAGTTCTG TGGCGCACCG AGATGAACAA CAGCGTGTCT
GTGGCGTTGA ACTTGGCCAC ACCTGATACG TTATTAAATG CCATATTAGC CCTAAATGGT
ACCCAAGCTA AAAGCTTGCC CCACAGCGTA TTGTCCCACG TGCAGACAGA ACTCATCGCT
AATATAAGTG CAGATCCGAA TTGGGCAGCC TTGCATCAGG ATACACAGAA GCTATCAATC
GATAATTGCA TTGCCCTTCC AGTTGTCACC CATTCAAATG AACTCTTAGC TGTGGTGAGT
GCATTTAATA TTGCCAATAC AACAGTGTCG AAAATGCAAC AAGCGCGCAT AGATATACTC
TGCTCAGCGC TTTGCCAGCT TATGCACAAT GAAGCCAATA CACGCCAGCT ACGCTCACTT
AAAAAAACCC AAGCCATGCA AATCGCTCAG CAACAACAAG AGATAGATGA ATCGAAGCTC
GTGCTACAAA AAGCGCTGTA TCAACGGGAT CATGTTCAAG AGCAACTCGT CGAAATGGAG
AGCGCGACTG CGTTGACCAC TATGCTTTCA AGCCTCGCTC ATGAAATGAA CACCCCTTTA
GGCGCTGCTT TGACGGCCGC ATCGCATGTG GAAACGGGCA ATGAGCGTTG TGAGCAGAAA
TTAGCAAACA ATTTACTGAA AAAATCTGAG CTAAAGCAGT TTCATCAAGA CTCTCGCACC
GCACTCGGTA TCATCAAGCG CAATGTACTG CGAGCTGACC AACTTATGGG GAGTTTTACC
CAATTGGTGC AAGACCAGCA CCAACGCAGT AAGCGTGAAA TCAACTTTTG TCATTATTTG
ACTGAAGTAT TGCTATCACT CAAGCCCAGA TTAAAAACCA CCCGCCACAG AGTATGTTTG
GATATACCGA GTGATTTGTC TGTTGTTTGT CATGCCGGCG CAATTGGGCA AGTACTGACC
CACCTCATTA TCAACTCAGT GGAACATGCT TATACAGATA ATCAGGCTGG AAAGATTACC
ATTCATGCGA GCAACACATA TATCGAGGAT CGGCCATGCT TGCATATTGT CTACATTGAT
GACGGTCAGG GCATGGAGCC AACGAGCGTT AGCAATTTAT ACAAGCCCTA TTTCAGCCTT
GTTGATAAAA ATAGTGAAAA CGGCCTTGGC ATGCATATTT GCTATAACTT AGTCGTCAAG
TTTTTAAAAG GGACAATCGA TTGCCACACC AGTGTCAACG GCGGCGTGCG CTTTGAATTA
ACTATTCCTA TATAA
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| Protein sequence | MTAHFAERTR LSIDSFKSDV LTALLGETSN AVHTLAALLQ ETLNSQYLVL WRTEMNNSVS
VALNLATPDT LLNAILALNG TQAKSLPHSV LSHVQTELIA NISADPNWAA LHQDTQKLSI
DNCIALPVVT HSNELLAVVS AFNIANTTVS KMQQARIDIL CSALCQLMHN EANTRQLRSL
KKTQAMQIAQ QQQEIDESKL VLQKALYQRD HVQEQLVEME SATALTTMLS SLAHEMNTPL
GAALTAASHV ETGNERCEQK LANNLLKKSE LKQFHQDSRT ALGIIKRNVL RADQLMGSFT
QLVQDQHQRS KREINFCHYL TEVLLSLKPR LKTTRHRVCL DIPSDLSVVC HAGAIGQVLT
HLIINSVEHA YTDNQAGKIT IHASNTYIED RPCLHIVYID DGQGMEPTSV SNLYKPYFSL
VDKNSENGLG MHICYNLVVK FLKGTIDCHT SVNGGVRFEL TIPI
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