| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3292 |
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| Symbol | |
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| ID | 4175069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3950606 |
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| End bp | 3952321 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056323 |
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| Product | hypothetical protein |
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| Protein accession | YP_662852 |
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| Protein GI | 109899597 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.764747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAG TAGCGGACGA TTCTATTCAC ATTTGGTTAT TCGTGTTTTT CACGAGTGTG
GTGCTAACAG CATGCGGCGG TGGTGGCTCT TCAGACTCAG ACTCAGACTC TGATAACACG
CCTGATGTCA TTGTGAATGC GGGACCAAGC TCTACGGTTA ATGAGGGGAC GACAGTCAAC
TTGCAAGGTG ATGCGCTAGG CACCACCGAT GCCTTGACCT ACGCTTGGTC TGCCTCGCCG
GCATTAACGA TTACCCATGA CGATACCACC ACGGGTGTGG CATCGTTTGT GGCGCCAACC
ACCAGCGATA CATTGACTTA TCAGCTAACC CTTCAGGCAA CTGATGGCAA TGGCAACGTT
GGCTCTGACA GTCTAGAAGT GACCGTTTTG CCGTTAAACA CTGCGCCAAG CGCGATCATT
TCCTATCAAC CGATTGACGG TTTTTCTAAT AATATCTTTC CAGCTGGCAC AGACGTTACC
TTAAATGGCG ACACCAGCAC AGACGCCGAT ACGACGGATG CAGATAACCC TATTGCCGCA
TATCAATGGC AACAACTTGC CGGAGTTGAT GTGCTTTCTG GGGTCAGTAG AGATGCAAGT
AACATTACCT TTACCACACC GATTGTCGAT GAAGACAACA CGTTAACCTT CGAGTTGACC
GTCACTGATC AAGAAGGCGC AACGGACACC GAAGAGCTGA CTATCACCAT ATTAAGTGCA
AGTAATAATG TGCCCACTGT TGATGCTGGT GTCGATCATC AAGTGTTTTC TGGAGAGAGC
ATTTTACTTT CAGGAACGGC CGATACTGCT ATTCCCTCTG CAAAGCCATT AACCTACTTG
TGGTTAACTG ACTCTACCTT AGAGCCACAA ATTAATAACG CCAATGTGTT ACAGACATAC
GCTGTTGCGC CTATGGTCAC CACGAGTCAG GTGTTGACCT TCACCTTAGA GGTTAATGAT
GCCAACGGTA ATGAGGTGGA CGACAGTATT TCGGTAACAG TACAACCGTT TCCTCGTAGT
TTAATAAACG ATACGGGGGT GATGCGCCAA GGCAGTGTGA ACGCAGTGAA CAGCTCGCAT
CAAGGCGATT ACCCTGCGCA AGACGGGCAA CGGGGGCGAG ACGTTATTGC GACTAACAAT
ATGCTTACCA AGGCCGGGCG GGGTGAAGGT GGCTTTGACT TTACCCGCCT AGATGACATA
GGCGATGAAG TGGACGATAC CAGCCAGCCA TGGCGCTGTG TACGCGATAA TGTGACCGGT
TTAGTGTGGG AAATTAAAAC CACCAATGGT GACTTACATG GCCGACGCCA TACCTACAGC
TGGTATTCAG AAGAGAACAA TGGTGGATAT AGTGGTCCGT TGAATCCAGC CACTCCTAGC
TGTTCGCTGG GCGACTGCAA TACGCAGGAT TTTGTTGAAG CCGTCAATGA CCAGGGCCTG
TGTGGTTTTT ACGACTGGAA GCTACCCAGT CATAACGAAC TTCTTTCAAT TATGCATTTT
GGCAAATCTA CCAGTCCTAT GTTAGATACC GATTATTTTC CCTACGCAGA TAACGGGCAA
ACCAGCAATA TATGGTACTG GACATCACAA ACCAGCGTCG ATGGTACCAA CGAGGAAGCG
CAAAATGCAT GGGCGATCGA TTTCTCTAGC GGGAATGACA ACTTTTTAAA TAAATCCACA
GCGGCTAACG TTCGTTTAGT CAGAGCAGGA CGATAA
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| Protein sequence | MRKVADDSIH IWLFVFFTSV VLTACGGGGS SDSDSDSDNT PDVIVNAGPS STVNEGTTVN
LQGDALGTTD ALTYAWSASP ALTITHDDTT TGVASFVAPT TSDTLTYQLT LQATDGNGNV
GSDSLEVTVL PLNTAPSAII SYQPIDGFSN NIFPAGTDVT LNGDTSTDAD TTDADNPIAA
YQWQQLAGVD VLSGVSRDAS NITFTTPIVD EDNTLTFELT VTDQEGATDT EELTITILSA
SNNVPTVDAG VDHQVFSGES ILLSGTADTA IPSAKPLTYL WLTDSTLEPQ INNANVLQTY
AVAPMVTTSQ VLTFTLEVND ANGNEVDDSI SVTVQPFPRS LINDTGVMRQ GSVNAVNSSH
QGDYPAQDGQ RGRDVIATNN MLTKAGRGEG GFDFTRLDDI GDEVDDTSQP WRCVRDNVTG
LVWEIKTTNG DLHGRRHTYS WYSEENNGGY SGPLNPATPS CSLGDCNTQD FVEAVNDQGL
CGFYDWKLPS HNELLSIMHF GKSTSPMLDT DYFPYADNGQ TSNIWYWTSQ TSVDGTNEEA
QNAWAIDFSS GNDNFLNKST AANVRLVRAG R
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