| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3255 |
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| Symbol | |
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| ID | 4175032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3903765 |
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| End bp | 3904433 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056286 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_662815 |
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| Protein GI | 109899560 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTG CATTAAAAGC GATATTCTCA CGCGATTTGG CTTTAGCCTA TCGCCAGCGT
TCAGAGCTGA TGCAGCCAAT GATGTTTTTC ATTTTGGTAA TAAGTTTGTT TCCGTTAGGC
ATAGGGCCAA ACCCAGCTAC ATTGCAAAAG GTTGGGCCTG GTGTGATATG GGTTGCAGCG
ATCTTGTCAT CATTGCTGGG TATGGAGCGT TTGTTTAAAG ATGATTATAA TGATGGTTCA
CTTGAGCAAA TAATGTTGTC GGCGACGCCG CTGCCGTTTG TGGTGCTGGT TAAAGTGTTT
ACCCATTGGC TCACCAGTAT CGTACCGCTT TTGTTGTTAT CACCTCTTTT GGCGCTTTTT
TTAAATTTAA CTGAATCTAT GTATTGGGCG TTGTTAAGTA CACTTTTATT GGGTACGCCT
TTATTGAGTT TAGTGGGCGC CATTGCCGTC GGATTAACCC TAGGGCTTAA TCGAGGGGGC
GTGTTATTAG CACTGCTGCT GTTGCCGGTG TTTATTCCAT TATTGATTTT TGCTACTGCA
GCGGTAGAAG CTGCGTCATT ACAATTACCG TATACGGCCC AATTAGCCAT TATTGGTGCA
ATGTTATTAA TCTCCTTGGC TTTGGCGCCC TTCGCTATTG CCTACGCATT ACGAGTGAGT
CAAAACTGA
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| Protein sequence | MSIALKAIFS RDLALAYRQR SELMQPMMFF ILVISLFPLG IGPNPATLQK VGPGVIWVAA
ILSSLLGMER LFKDDYNDGS LEQIMLSATP LPFVVLVKVF THWLTSIVPL LLLSPLLALF
LNLTESMYWA LLSTLLLGTP LLSLVGAIAV GLTLGLNRGG VLLALLLLPV FIPLLIFATA
AVEAASLQLP YTAQLAIIGA MLLISLALAP FAIAYALRVS QN
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