3 homologs were found in PanDaTox collection
for query gene Patl_3228 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_3228  prepilin-type cleavage/methylation  100 
 
 
138 aa  280  4.0000000000000003e-75  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000180894  n/a   
 
 
-
 
NC_008463  PA14_29530  type II secretion system protein  26.28 
 
 
141 aa  43.9  0.0007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_16130  hypothetical protein  25.95 
 
 
148 aa  41.2  0.004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
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