Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_29530 |
Symbol | |
ID | 4380703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2560976 |
End bp | 2561401 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324949 |
Product | type II secretion system protein |
Protein accession | YP_790521 |
Protein GI | 116050659 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCGC GGCAGGAAGG CTTCACGCTC CTGGAGGCGG TGGTTGCGCT GACGCTCCTG GCAGTGGTCG GCGGTGCGCT ATTCGCCTGG CTCAACAGTG CCTTTCGGAG CATGCAGCGG GTCGAGGCGG CCGAGCTGCG CATCGAGACG GCCCGGGTGG CGATGGCCTA TCTGGAGCGC ATGAACCCTG CGCTCGAACC CGCAGGCAGG GTCCGGCTGG GGCACTACCG GCTGGAGTGG CGAAGTTCGC CGCTGTCCGC ATCGAAAGCG GCGGTGGGCC GCCATAGCGG CAGTCCGGGC ATCTACGACG TGACCTTGTT CAGGGTCGTC GCCAGCATCC AGGCCGGCGA TGGAACGCCG CAGGCGCTGC AACTGGAGCT TCCCGGTTAC GTGGTCATCC CAGCGCGACT GGGTGATGGA CCATGA
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Protein sequence | MPARQEGFTL LEAVVALTLL AVVGGALFAW LNSAFRSMQR VEAAELRIET ARVAMAYLER MNPALEPAGR VRLGHYRLEW RSSPLSASKA AVGRHSGSPG IYDVTLFRVV ASIQAGDGTP QALQLELPGY VVIPARLGDG P
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