Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3066 |
Symbol | |
ID | 4174838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3700069 |
End bp | 3701277 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638056092 |
Product | glycosyl transferase family protein |
Protein accession | YP_662626 |
Protein GI | 109899371 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTTAT TTAGTATTAT CATTCCGGTT TTTAATCGCA CAAAATCACT TAAAAAAGCA CTCGAATCGG TGTTGTCGCA ATCCATTCAA AACTATGAGG TATTGATTGT TGATGATGGT TCGACGCCCT CTATTGCAGA GGGAATTGAG CAGCTAGTGT TGAGTTTTCA AGAACCAAAA CTAAAGCTTT TACGCCATGC CATTAATAAA AACGGGGCCG CTGCAAGGAA CACAGGTATT AATGCTGCTT CAGGCAAGTA CATCTGCTTT TTAGACTCAG ACGATTTTTG GCTCCCAAAT AAACTGGAAC GAGCCTTAGA ATACATCAAC ACAAAAACCT GTAGTGATAC CTTTTTAATC CATCATCAAT ATAGCAATAG TGAAAACGGT AAACTCACTG AGTCTTTACC AAAAGCTGCG AAAGCTAGCA GTGAATCTGT AGCGCATTAT TCTTTTGTTA CGAACAATGT TGGTGGCATA CAATCAAGTA CCATTTGTGT ACCAACAATG GTGGCTAAAA ATTGTTTATT TGATGAAAGG TTCTCAGGTC ATCAAGATTG GGATTTTGCA TTACAGGTAG GAGCAATGAC TCAACACTTT TACTTTATCC CTGAGCCTTT AACAATTCGC AATAAAGATT CTGATGATAG TGTGGCGGAT AACCTTAGCT GGGAATATTC CTTGTGGTTT TATGTGCAAC GAGCAAGTTA CTTTGATACA CAATCTGCCT TGTATTTTTT CCAACGGGTG GTGTTAAGAA AGGCGGTTTT TTTCCTAGAA CTTATGCCTG TTCTTAAGAA TAAATTAATG CTAAGAATTT TGCTTAGTAG TCCACGGGCA ACGATAAAGG TTTTGATTTC ATTTGTTACG CAGGTTCGGC AATTACAAAA AAGAATCCGG CAGGTAGAAT TAACCTGCAA AAATCGAAGT GTGACCCACT TGATGATTTG GGGCGGGAAT GATTATGCTA GATCCCTTAT TTTAAATCTA AATAAGCGCT TTAAGGTATT AAGGGTAATT GATTCCAAGG TTATGCACAG TCAGGCAAAA CTACAAGGTA TTGCTGTAAC GACACTTCAG TCCATAAGTA AGGAAGAATT AGCCATGGTA CAGGGAATAA TTTTGGCAAC TAATAGACAT CAAAATTCGA TGAAGCAAGA CATATTAGGT TTTGCCCCTA GGCTTATAGA AAAAGTAATA GAGTTTTAA
|
Protein sequence | MLLFSIIIPV FNRTKSLKKA LESVLSQSIQ NYEVLIVDDG STPSIAEGIE QLVLSFQEPK LKLLRHAINK NGAAARNTGI NAASGKYICF LDSDDFWLPN KLERALEYIN TKTCSDTFLI HHQYSNSENG KLTESLPKAA KASSESVAHY SFVTNNVGGI QSSTICVPTM VAKNCLFDER FSGHQDWDFA LQVGAMTQHF YFIPEPLTIR NKDSDDSVAD NLSWEYSLWF YVQRASYFDT QSALYFFQRV VLRKAVFFLE LMPVLKNKLM LRILLSSPRA TIKVLISFVT QVRQLQKRIR QVELTCKNRS VTHLMIWGGN DYARSLILNL NKRFKVLRVI DSKVMHSQAK LQGIAVTTLQ SISKEELAMV QGIILATNRH QNSMKQDILG FAPRLIEKVI EF
|
| |