| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2940 |
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| Symbol | |
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| ID | 4174708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3563260 |
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| End bp | 3564156 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055963 |
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| Product | hypothetical protein |
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| Protein accession | YP_662502 |
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| Protein GI | 109899247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000421874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTAA AATTGTCGCT ACCTTTGATT AAATCACTGA GTTTGCATCT CGTTTTCGGA
GTGCTTCTCT TTGCAGGCAT GGATGTTAAG TTGCCTCAAG AAACGCTTGA AATGGCGTCA
TCTCAACCGG TTATAGAGGC CGTGGCGGTA GATGCCAACG CGGTTGATGA CCAAATTAAG
CGGATTGAAG ATCAGAAGAA GCGCAAGCAA AAGGTTGAAG AAGACCGAAT CGCTGAACTG
GAACGTCGTG CGAACGAGGC TGAACGCAAG CGTAAACAAC AAGAGCAAGA AGCGGTTGAA
ATAGAGCAAC GCACCAAGCG CCAACGTGAA GAACGTAAAC AGGCTGAGCA AGCTGCAATT
GCTGCGCGTA AAAAGCAAGA GCGAGAAAAG GCCAAAGCGA AAGCAGCGGA GGCGGAGCGT
AAACGCAAAG AGTTAGAGCG TAAGAAGGCG GAAGAGCGAG CTAGAAAGGC CAAGGAAGCG
CGCGAGAAGG AAGAAAAAGC CTTGAAAGAG GCGCAGCGCA AGAAAGCAGA AGCAGCGGAG
AAAGCGCGTC AAGAGCGTGC CTTGCAAGAT CAACTTGAAG CTGAGCAGGC TGTGCGCCAG
CAGCGACGAA GCAAGCAAGT ATTAACCGAA GTACAAAAGT ATCAAGCCCT GATCCATCAA
GCTATTCAGC GACAGCTAAT TGTAGATAAC TCAATGCGCG GAAAATCCTG CCAGTTGAAT
ATCCGTTTAG CATCGTCTGG TTTAGTTATT CAGGTAAAAG AACTAGGTGG AGATCCTATC
TTATGCAGAG CTGCTAAATC TGCTGTTTTC AAGGCCGGTA CCCTTCCGGT ATCAAAGGAA
GCTGATGTGT ATGAGAAGCT CCGTGATATT AATTTAACTG TAGAGCCCGA TTTATAA
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| Protein sequence | MKLKLSLPLI KSLSLHLVFG VLLFAGMDVK LPQETLEMAS SQPVIEAVAV DANAVDDQIK
RIEDQKKRKQ KVEEDRIAEL ERRANEAERK RKQQEQEAVE IEQRTKRQRE ERKQAEQAAI
AARKKQEREK AKAKAAEAER KRKELERKKA EERARKAKEA REKEEKALKE AQRKKAEAAE
KARQERALQD QLEAEQAVRQ QRRSKQVLTE VQKYQALIHQ AIQRQLIVDN SMRGKSCQLN
IRLASSGLVI QVKELGGDPI LCRAAKSAVF KAGTLPVSKE ADVYEKLRDI NLTVEPDL
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