| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2868 |
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| Symbol | |
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| ID | 4174627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3479152 |
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| End bp | 3479541 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055882 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_662430 |
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| Protein GI | 109899175 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000311414 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATTA AACAATTAGC GCAAGTCACG AACGTCAGCG CCAAAACAAT CCGCTATTAT
GAAGACATTG GGCTACTGCC CGAGGCAAAA CGTGGGGAAA ACGGCTACCG CTACTATCAG
CAAACTGATG TGTCTTCACT GAATTTTATT CGTCGCTGCA AAGAGTTGCG CATGCCTCTG
GCAGACATAA AAAGATTGGT GGCTGTGCAA AGTGATGGCA ATGCCCCCTG CGCAGAGGTC
GACGCATTGA TTGCCCAGCA ATTAGAGCAA ATCCGCGTTG CCCAATATGA ATTGCAACAA
CTGGAAAAAA ACCTGCAAGC GTTAGCCGAC AGCTGTCAAC ACGGCCAGAT AAAGAACTGC
GATATTTTAA ATCACTTACA TGCCAACTAG
|
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| Protein sequence | MQIKQLAQVT NVSAKTIRYY EDIGLLPEAK RGENGYRYYQ QTDVSSLNFI RRCKELRMPL
ADIKRLVAVQ SDGNAPCAEV DALIAQQLEQ IRVAQYELQQ LEKNLQALAD SCQHGQIKNC
DILNHLHAN
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