| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2651 |
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| Symbol | |
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| ID | 4174411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3216382 |
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| End bp | 3217287 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055670 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_662218 |
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| Protein GI | 109898963 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCTTT GTCAGAGTTA TATGAATATA AGCTTCAATG GGATCATCGA ATTTGTAGCT
GTGGCTGAAA CCCACGGTTT TTCAGCCGCC GCACGCAAGT TGGGCGTGAA TGTGTCACAC
ATCAGTCGCA AAGTGGCGGC CTTAGAAAAA GAGCTTGGGG TAAGTTTACT GGCGCGTAGT
ACTCGAACGG TGCGCTTGAC TGATGCCGGT CAGGCGTATT TTGCTCGTTG CCAAGAATTG
GTGTATGGCT TACAGGAAGC CAACGAAACC GTATTAGACA AACAAGTTGA GTTAAGTGGT
GTGCTGAAAG TCTCTGCGGC AGGCGAATTT GCGGAGCAAC ACATTGCCCC GTTACTGATT
GAATTTGGCC AATTGCACCC TAAACTCACC ATTGAAATGG ATTTTAATTC GCAGATGGTC
AATTTTGTTG ATGACGCGTT TGATTTCTCC ATTCGCTATG GTCCCATGAA AGACTCTAGC
TTAATTGCCC GCAAACTGAC CAATCGCTCA TTAGTGGCAG CCGCCAGTAA GCGCTATCTC
GAGGTTAACG GCACACCCGC GCACCCCAAT GAACTGACTT CGCATCAATG CTTGATGACC
AATAATTCAA CTTGGTTTTT CGACAATCAG GGTAAACCAC TTGAAGTAAA ACTAGATGCA
AGATGGCGCT CTAACAGCGT CCGCAGTGTG GTACTCGCAT GTGAAAGAGG CTTGGGCATC
GCCTACTTGC CCCGCTCAAG TTTTGGTGAT GCACTGAAAG GTGGCTCGGT GGTTCCTATA
TTAGCGCCCT TCTGGAATCG CGAAATAGCC ACTTGGATTG TGTACGCAAA CCGGAACTTT
TTGCCTGCAA AGGCACGTCT TGCGATCAAC TTCTTACTAG AAAAATTCGA ACACTGGCAA
GAATAA
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| Protein sequence | MYLCQSYMNI SFNGIIEFVA VAETHGFSAA ARKLGVNVSH ISRKVAALEK ELGVSLLARS
TRTVRLTDAG QAYFARCQEL VYGLQEANET VLDKQVELSG VLKVSAAGEF AEQHIAPLLI
EFGQLHPKLT IEMDFNSQMV NFVDDAFDFS IRYGPMKDSS LIARKLTNRS LVAAASKRYL
EVNGTPAHPN ELTSHQCLMT NNSTWFFDNQ GKPLEVKLDA RWRSNSVRSV VLACERGLGI
AYLPRSSFGD ALKGGSVVPI LAPFWNREIA TWIVYANRNF LPAKARLAIN FLLEKFEHWQ
E
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