| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2616 |
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| Symbol | |
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| ID | 4174376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3178609 |
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| End bp | 3179670 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638055637 |
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| Product | beta-lactamase |
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| Protein accession | YP_662185 |
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| Protein GI | 109898930 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATACAT TAATTACAAT AGTTCTTTTA TCTGTGCCTT TTACCACACT TGCCAATACA
GTGAAAACTC ACGATGAACT GTCTACAGCT TTAGAAAAAA TTCGGATAAA AAATGATATC
CCTTCTATGT CCGTCGCAAT CATTACGTCA GGTGAAATAA CGTATATTAA AGGTTTCGGT
TTTCTAGATA AGAAGCAGAA AAAAGCTACG ACTGGAGAAT CATTATTTCG TATCGCTTCA
ATTTCTAAGT TGTTTACTGC TCAAGCAATA ATGCAGCTGG TCGAGAAAAA TAAAATAGAG
TTAAATGAAA AAGTAGGACG ATATTTACCC AGCTTTAAAG AGAGTAACAT TACAATTAAG
CAGCTACTTA CTCACTCTTC AGGGATTAGC GATACGATTA AACCTGTAGG TTTTGAAAAG
CAAAGAACAG TCGATTCCTA TTTAGGCTTA GTCAAACGGT CTTTACCAGA AAAGAGTGAA
AGTCACGATT TTGAATATAG TGACACTAAT TTTAATGTTC TAGGAGCACT CATAAGCACT
GTTTCAGTAG ATAGTTATGA AAAGTATATT TATAACAATA TTTTGAAGCC CAGCAATATG
ATAAAAAGTG GCTATTTCGA TAGTGAAAGT GCATATTTTT CTGAAACGAA ACCAACATAC
AAAGGCAAGT TACTGGATAA AGCTGATCAG AGGCCTTATG ACCTATCATT TAATCCAAGC
GAAGGCCTTA TTTCAAACGT AAATGATCTA AGTCAGTGGC TTAAATTGAC ACTTTCTGGT
GATCCCTCTC TTCTGAAAGC GCAGACTTAT AAAGAGATGT TAAAGCCCCA AGTCAAAACT
GCTTGGGGTG AAATATATAT GGGGTTGGGT TGGCAAGTGT ATAACCATTC AAACGACATA
ATTGCTAGGC ATCCAGGAAG CATTCGAGGC TATAAGTCAC TTATCCTTAC TTACCCTGAC
AGCAAAAATG CGCTGATACT CCTTACTAAT TCAAGCAACA CACCTCGATG GGAAATTGCA
AAATTAATTA CAAAAATTTT AAAACAAAAT ACACAGTGGT AG
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| Protein sequence | MYTLITIVLL SVPFTTLANT VKTHDELSTA LEKIRIKNDI PSMSVAIITS GEITYIKGFG
FLDKKQKKAT TGESLFRIAS ISKLFTAQAI MQLVEKNKIE LNEKVGRYLP SFKESNITIK
QLLTHSSGIS DTIKPVGFEK QRTVDSYLGL VKRSLPEKSE SHDFEYSDTN FNVLGALIST
VSVDSYEKYI YNNILKPSNM IKSGYFDSES AYFSETKPTY KGKLLDKADQ RPYDLSFNPS
EGLISNVNDL SQWLKLTLSG DPSLLKAQTY KEMLKPQVKT AWGEIYMGLG WQVYNHSNDI
IARHPGSIRG YKSLILTYPD SKNALILLTN SSNTPRWEIA KLITKILKQN TQW
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