Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2506 |
Symbol | |
ID | 4174260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3040226 |
End bp | 3041578 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055522 |
Product | hypothetical protein |
Protein accession | YP_662076 |
Protein GI | 109898821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.767469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCA CACAGTGTAT CGGACCAGCC CTATTATCAG GTGCAATAGC GAGCTCTTTC AGCACATCGG CTGTAGAAGT TAGTGAACAA GAACTGGCGA CACTAAAAGC ACAAATTTCA GCGTTGCAAG CTCGCTTAGA ACAGCTGGAA AACCAAAATA AGCCCACTAA TACTGCGGCA AATCCCTCTC TGTCATCCAA CGCAAAATCT ACTCAATCAG TTGATTTAGC CCAGCAAGAT AAGAAAGTCG AAACAAACAC TGCTGAAACC GAACGTGAAG AGCCTGAATC GACCGATGGG ATCACCTTTG GCGGTGCCAT TCGAACGAAT TACAGTTATA CCTCTTATGA TGACGGTAAT AAGAACCGAG GTGGCGACTT CGATTTTGAT ATTTTCCGTA TCAACATGAG TGGAGAAGTA GGGGGGGTCA CTTTAAATGG TGAAATTCGC TTTTTTGATT ATATGACAGC TGTTAAATAT GCCTATGCTG GTTATCAATT CAGCGAGAAC TGGCAAGTAC AAGCTGGTAT TACTCAAGTG CCATTTGGTA ATCAGTCTTA TAATTCGCAG AACTATTTCT TTAGCACTAA CTACTACTTG GGTTTAGAGG ATGATTTTGA TTTAGGCGTG GTCTTTAAAC GTAGCGTAGC TGACAACTGG CAGCTAGATG TGGGGTTCTT TAAAAATGAT GAGCTTGGCG GAGTTGATGG CTACGTAGAC AATCGATCAG ACCGCTATTC ATATGATATT GTTGGTATTC GAGCACAAGG TGATGGCATC TACGATGAAC CGAGCGAAGG ATTAGGGGAA TACAATACTT TAGCAGGTCG CTTTGCTTAT CATTTTACCA CCGGGGAGGT GAAAACTGAG GTCGGTGTGT CTGCGTTACA AGGCGGTATT CATAACGGTG AAAATCGCGC TGGGGATTAT CAGGCGTGGG CGTTTCATAC CAGCAGTCAA TACAGAAATT GGCATTTACA ATTTCAACAC AGTCAATATG ACTATGATAT TGGTGAGGCT GACCGCTTAG CCGTTGGCGC GTATTCGTTT TATGATTCAA TTGCTGCTGA TGCTAAATCA ACCACACTCA ACATTGCCTA TGACATGGCT GTTGATTTCG GACCTGTAAC TGATCTGCAG TTCTACAACA ATTTTGGTTT GGTATACGAC AAGTCTGACA ACAGCGAAGA TACCATGATG AATGTGTTGG GCATGTCAGT GGCGGCAGGT GGGTTATTTA CCTATTTCGA TTTGGTGCAC GCAAAGAATC AGCCTTTTGT GGGGGGCAGC GCTGCGGGTG ATACCGATGA AACGGAGCAA CGCTTTAATA TCAATATTGG CTACTATTTC TAA
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Protein sequence | MKLTQCIGPA LLSGAIASSF STSAVEVSEQ ELATLKAQIS ALQARLEQLE NQNKPTNTAA NPSLSSNAKS TQSVDLAQQD KKVETNTAET EREEPESTDG ITFGGAIRTN YSYTSYDDGN KNRGGDFDFD IFRINMSGEV GGVTLNGEIR FFDYMTAVKY AYAGYQFSEN WQVQAGITQV PFGNQSYNSQ NYFFSTNYYL GLEDDFDLGV VFKRSVADNW QLDVGFFKND ELGGVDGYVD NRSDRYSYDI VGIRAQGDGI YDEPSEGLGE YNTLAGRFAY HFTTGEVKTE VGVSALQGGI HNGENRAGDY QAWAFHTSSQ YRNWHLQFQH SQYDYDIGEA DRLAVGAYSF YDSIAADAKS TTLNIAYDMA VDFGPVTDLQ FYNNFGLVYD KSDNSEDTMM NVLGMSVAAG GLFTYFDLVH AKNQPFVGGS AAGDTDETEQ RFNINIGYYF
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