Gene Patl_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2300 
Symbol 
ID4172454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2800762 
End bp2801205 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content45% 
IMG OID638055309 
Productprotein of unknown function, Spy-related 
Protein accessionYP_661871 
Protein GI109898616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000365275 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAATTACTGG CGTTTTATTA AGTGCATGTA TTGCAACAAC GGCTTTTGCT 
GGTGCAAAGC ATTCTGACGG TCACAGAGGC CAAGGCTTCT TACCCATTCA TAAAATGGCA
CGCGTGCTCG ACTTAAGCGA TGAGCAAAAA GATCAACTTA AAGCGTTGAA AGAAGAAATG
AAAGCGAACC GCCCAGCAAA GGGCACACAA ACGTCGCTTA AAGCGCAACT AGCGGCGCTT
GATCCCAGCG ACGCCAGTTA TGAGCAAGAG CTTAGTCAAC TCGCCGATTT AAGTGCGGAA
CGTGCAAAAG CAAGAGTGTT GAAAATGGCC GATATGCGGA TCAAAGTGCA GCAAATATTA
ACCGCTGAAC AGCTTGAAAA ATTTAATGAG ATCAGTGAGA AGCGTGCCAA ACGCCATCAT
AAGAAACGTG ACGACAAAGC GTAA
 
Protein sequence
MKKLITGVLL SACIATTAFA GAKHSDGHRG QGFLPIHKMA RVLDLSDEQK DQLKALKEEM 
KANRPAKGTQ TSLKAQLAAL DPSDASYEQE LSQLADLSAE RAKARVLKMA DMRIKVQQIL
TAEQLEKFNE ISEKRAKRHH KKRDDKA