| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1679 |
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| Symbol | |
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| ID | 4172270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2004547 |
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| End bp | 2005926 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054688 |
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| Product | peptidase M28 |
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| Protein accession | YP_661254 |
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| Protein GI | 109897999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACA TTCTTTCTGC AGGTATCACA CTTGCAATGA CGTTGACCAC TGCTATCAGC
TATGCCCAAA GCCCTCCTAG CTATCAGGAC CAACAACGCC TGCACGACAT AGCAAAAGCA
GTTTCTGCAG AACATATCGA ACAGGATATT AGAACCCTAG TAGGATTCGG CACCCGCCAT
ACTTTATCTG ATACGGCATC AGACACCCAA GGTATTGGTG CAGCTAGACG CTGGATAAAA
AGCGAATTCG AACAAATATC GCAAGCGTGC GGCGGTTGTT TAGAGGTGTA TTTTCAATCT
AAAAGCATCA GCGGTGAACC CCGCATTCCT AACGCCACGG AAGTAGTGAG TGTTATCGCC
GTACAGCGCG GCAGTCACGA TCCTGACCGC TACGTGTTAA TGTCAGGCGA TATTGACTCC
CGCGTTTCTG ATGTGATGAA CAGTACGTCT ATATCTCCTG GCGCTAACGA CAATGCATCG
GGTGTCGCGG GCACATTAGA AGCCGCGCGA GTGTTATCAA AATATAAATT TAATGGCAGC
ATCGTTTACG CGGCATTAGC TGGGGAGGAA CAAGGTTTAT TTGGCGGTAA GATACTGGCT
GAACAGGCTC AAAAAGACGG TTGGCGTATC AAAGCCGTGC TCAACAACGA TATGATTGGC
AATATCGAAG GCATAAATGG CGTTATTAAT AACACCACAG CCCGTATATT TGCCGAAGGC
ACTCGCCAAA CTGAAACCCC GGAGGAAGCG AAAACACGTC GCTTTACTGG TGGTGAGGTC
GATTCTCCGA GTCGCAACTT AGCGCGTTAC ATCGACTGGA TGGCAGACCG CTACATTCCT
AACCTAGATA CCATGGTCAT TTACCGTCTA GACCGCTTCG GGCGCGGAGG GCATCATCGC
CCGTTTAACG ATTTGGGTTA CCCTGGTGTA CGCATTATGG AAACCAACGA AAATTACAAC
CGTCAACACC AAGATATACG CAGCGAAAAC GGCATTGACT ACGGTGATAC CATCGAAGGT
GTGAACTTTG ATTATGCCGC AAAACTCACA GCGTTGAATG CTGTATCACT TGCAGGAATG
GCATGGGCAC CCTCCCCGCC GGCTAAGGTA AAAATTGCGG GGGCAGTAAA ACCAAGCACC
ACCTTAAGCT GGCAGGCGCT GAATGAAGAG CAAAACCCGC AACTCAAAGG TTATAAAATT
TATTGGCGCT ATACAGATGC TCCCCAGTGG CAGTTCAGCC GTTTTGTGGG CAATGTGAAT
ACCTTTACCC TTGAGAACGT TGTGATTGAT AATTACTTTT TCGGCGTTGC CAGTGTCAGT
CAAGACGGTA CAGAAAGTCC GGTTGTTTTC CCCGGCGCCG CGGGAGCGTT TGGCGAATAA
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| Protein sequence | MTHILSAGIT LAMTLTTAIS YAQSPPSYQD QQRLHDIAKA VSAEHIEQDI RTLVGFGTRH
TLSDTASDTQ GIGAARRWIK SEFEQISQAC GGCLEVYFQS KSISGEPRIP NATEVVSVIA
VQRGSHDPDR YVLMSGDIDS RVSDVMNSTS ISPGANDNAS GVAGTLEAAR VLSKYKFNGS
IVYAALAGEE QGLFGGKILA EQAQKDGWRI KAVLNNDMIG NIEGINGVIN NTTARIFAEG
TRQTETPEEA KTRRFTGGEV DSPSRNLARY IDWMADRYIP NLDTMVIYRL DRFGRGGHHR
PFNDLGYPGV RIMETNENYN RQHQDIRSEN GIDYGDTIEG VNFDYAAKLT ALNAVSLAGM
AWAPSPPAKV KIAGAVKPST TLSWQALNEE QNPQLKGYKI YWRYTDAPQW QFSRFVGNVN
TFTLENVVID NYFFGVASVS QDGTESPVVF PGAAGAFGE
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