| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1521 |
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| Symbol | |
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| ID | 4172970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1828656 |
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| End bp | 1829666 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054530 |
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| Product | putative FecR |
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| Protein accession | YP_661097 |
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| Protein GI | 109897842 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA ATATGAATCA AGAAGTAATA CAACAGCAAG CGGCGACTTA CGTTGCGCGT
CTATATTCAG GTGAGCTTAG CGCGGAAGAA GAAATGCAAA TTTACGTCTG GTGCGACAGG
TCTCCTGAGC ACCAGCAGGA GTTTGACTCC ATGCTTGCTA TTTGGGACAC CAGCAATCAA
CTGTTTCAAA CTGCACAACC AAATAAAAAT AAGAAAATGA AAAAGAAAAA GAAAAACGCT
TACTGGTTAA CGAGCGTTGC TGCAAGCTTA GTATGTACTG TGTTAGTGAT GTGGTATCTC
ACGCTCCCCG GCCCCGCCCC TTTGTATCAA GCGGCCATCC CTAAGCCGAA CACCTACCAC
ACAGCCATAG GTGAAATAAG CACGGTCGGC TTGCCCGATG GCAGTGCCGT AACACTCAAC
ACCGACAGTG CGATCAGAAT AAATTTTACG GGTCAGCAGC GCCGAGTATG GTTAGAGCGC
GGCGAAGCAT TTTTTGATGT AGCGAAAGAC GAAAGTCGGA TCTTTAGCAT TAACACCGGC
GAGAAAACCA TTCGTGTCAT TGGTACAAAA TTTAATGTGC GAAAGTCTGA TGCAACGCTA
AAAGTATCGG TAACAGAAGG TTTAGTCGCA ATACAGCCCT CGGCGTTGGC CTCGAGTGAG
CATATAGATT TTGAAGAAGC GGAAACCCTA CTCCCCGCGG GCTCAGTCGG CGCTTTTAAC
GGCACCAGTG AAGTGATTAC CCATGTGACC TCTAAGGAAG TGCTGGCTAA CCAACAATGG
CGACAAGGCA TATTTCGTTT CAACAATGAG CCGCTGGCGA ACGTTATCAC TGAATTTAAC
CGTTATCGCT TGAAGAAAAT CACTCTTCAA AATCGAGATC TTGGCAAACT AAAAATAAGT
GGGGTATTTA AGTTAAAAGA CGGAGACAGT ATTTTGTCCG CCCTTGAAGC CGCGCTACCT
GTTGAGATTG ACCGTTACCC TGAGTATATA GAATTGAGCG CAAGAAACTA A
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| Protein sequence | MSSNMNQEVI QQQAATYVAR LYSGELSAEE EMQIYVWCDR SPEHQQEFDS MLAIWDTSNQ
LFQTAQPNKN KKMKKKKKNA YWLTSVAASL VCTVLVMWYL TLPGPAPLYQ AAIPKPNTYH
TAIGEISTVG LPDGSAVTLN TDSAIRINFT GQQRRVWLER GEAFFDVAKD ESRIFSINTG
EKTIRVIGTK FNVRKSDATL KVSVTEGLVA IQPSALASSE HIDFEEAETL LPAGSVGAFN
GTSEVITHVT SKEVLANQQW RQGIFRFNNE PLANVITEFN RYRLKKITLQ NRDLGKLKIS
GVFKLKDGDS ILSALEAALP VEIDRYPEYI ELSARN
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