Gene Patl_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1463 
Symbol 
ID4173620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1757832 
End bp1758281 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content45% 
IMG OID638054473 
ProductMarR family transcriptional regulator 
Protein accessionYP_661040 
Protein GI109897785 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC AACTTAAGAT ATTTCACTTG CTGCAGTTAG CGCATGGTGC GCTTTTTAAA 
GCCGCGGATA AAAAACTCAA AAGCGAGCTG CACGTTAGCA CGACTCAATT AGCTGTGCTT
TTCACATTAT CTAAACAGGA TAACGCGCCG ATCACAGCCA TCGCTGATTC GCTCAACATG
AGCTACTCCA GCTTATCAGG CGTGATTGAC AGAATGACCA AAGCAGCACT GGTTACCCGC
CAACAGGGGA CAACTGATGC TAGGGTACAA AATGTTATCT TATTGGCCAA AGGACGTGAT
CTTGCACAGC GCTCCGCTTC AAAGGTACGC AATATAAATC ATGCCTTGTT GGAACATTTC
ACCCTAGATG AGCAAGAAAC CATTGCGCGG TTTCTAATGC ACGTCACGCA AAATGCAGAA
AACATAGTCA GTGAAAAAGA ACCGTTTTAG
 
Protein sequence
MKKQLKIFHL LQLAHGALFK AADKKLKSEL HVSTTQLAVL FTLSKQDNAP ITAIADSLNM 
SYSSLSGVID RMTKAALVTR QQGTTDARVQ NVILLAKGRD LAQRSASKVR NINHALLEHF
TLDEQETIAR FLMHVTQNAE NIVSEKEPF