Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1377 |
Symbol | |
ID | 4171874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1660746 |
End bp | 1662029 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054390 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_660957 |
Protein GI | 109897702 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTT GGAATCTAAT CTGTTTTTTA GGGGCACTGG CTGTCCTTAT CGCTTTCACC AATCAATTCG TGCTTAAACT GCAAACGACT ATCGCTATTA CGACGGGCTC TGTGGTGATT TCTCTGTTAT TGATTTTAGC AGTTAAACTG CTGGGGGATG ACTCTGCCCA GTCGCTTATC AATGTGGTCA GCAGACTAAA CTTTAACCAG ATTCTGCTTA ATGGCATGTT GGGCTTTTTA TTATTTGCAG GGGCTATGGA GATTGATTTA CGCGCTTTGC GTCGCCAGCG ATGGGAAATC ACCATACTCG TGCTGTTTTC TACCCTTGTT TCTACCATCA TAGTCGGGTA TTTAAGCGCC TTTGTTTTAG CGCAATTTGG TTGGGATGTG CCGTTTATAT ATTGTTTGTT GTTCGGTGCG CTTATCAGCC CCACAGATCC CATCGCTGTG CTCGCGATCA TTAAACAAAT GCAGGCGCCT AAAAACATTT CGATTCAAGT CGAAGGAGAA TCCTTGTTCA ATGACGGGGT AGGCTTGGTT ATTTTTTCTA CTCTGTTTGC TGTTGCATTT AGCGGTGTTG AGCCAACAGT TAGCAGCGTT GCTGAGCTGT TCTTAACAGA AGCGGTAGGG GGAATTATTT TTGGTTTAGT GCTGGCGGTG ATTGCCCATT ACTTGATCAT AAAAAGTCCA GATATTAACG TTCGCTTATT AGTCACCTTG GCCATTCCGT CTGCGGGGTA TGCGCTTGCG ATCGCATTGC ATGTATCAGG TGCGCTGGCG ATGGTGATGT GCGGAATTTT CATCGGCAAT GTCACCCGCT CAAAAGGTGC GCCTTTAGCA CGAATTTCTA GTATCCGCTT TATCAAGAAC TTCTGGCATG CCACAGATAC CTTCCTAAAT GCTTTGTTGT TCTTGCTGAT CGGCATGCTG ATTGTCAGTA TGACCCTATC ATTAGACGAG ATCTTGATTG GTCTTTGTAT GATCCCCGCC GTGTTATTCG CGCGCTTCAT AAGTGTTGGC ACTCCTTACT TAGTCTTTAG GCAGTTTAGG CGCTACGACT TAAACTCGGT ACGTATTCTG ACTTGGGGTG GTTTACGAGG TGGTTTAGCG CTCGCGATGG CGGCGTCTAT TCCTAATGAC ACTATGTTAG GCAATGGTCA TAATTTGCAT AATTTAATGG TCATCGTGAC CTACATAGTG GTTATTTTTT CCATCGTGGT ACAAGGCTTA ACCATTGCTC CTTTGATTAA GAAGAGTATT GCCGCTGCTG AGTCTAACAA TTAG
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Protein sequence | MDAWNLICFL GALAVLIAFT NQFVLKLQTT IAITTGSVVI SLLLILAVKL LGDDSAQSLI NVVSRLNFNQ ILLNGMLGFL LFAGAMEIDL RALRRQRWEI TILVLFSTLV STIIVGYLSA FVLAQFGWDV PFIYCLLFGA LISPTDPIAV LAIIKQMQAP KNISIQVEGE SLFNDGVGLV IFSTLFAVAF SGVEPTVSSV AELFLTEAVG GIIFGLVLAV IAHYLIIKSP DINVRLLVTL AIPSAGYALA IALHVSGALA MVMCGIFIGN VTRSKGAPLA RISSIRFIKN FWHATDTFLN ALLFLLIGML IVSMTLSLDE ILIGLCMIPA VLFARFISVG TPYLVFRQFR RYDLNSVRIL TWGGLRGGLA LAMAASIPND TMLGNGHNLH NLMVIVTYIV VIFSIVVQGL TIAPLIKKSI AAAESNN
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