Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1165 |
Symbol | |
ID | 4173216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1404989 |
End bp | 1405546 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054172 |
Product | hypothetical protein |
Protein accession | YP_660745 |
Protein GI | 109897490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.712882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGAC ATTACTACAT AACTGATGAT TTAGGAGATT TAGAACAAGT TGAAAGGGAA CTAGTAGACA ACGGCTTGAC GGTACCTCAA TTTCACGTAC TCAGTGAAAA TGACGCCGAG TTAGAAAAAC ACCATTTACA TGCAATAGAA TCCGTCTTAA AAAAAGACGT CGTTCACTCC ACTCAGTTAG GCGCCGTTAT TGGCATTATC GGCGCATTCC TCATTTTATT AGTGGCGTAT TTATTTAATT GGCATATGAC GGCTGTAGGC TGGATCCCGT TTGGTTTTTG TGCGGTGGTC GTTTTAGGGT TTTGTACATG GGAAGGTGGC TTGATAGGCA TTCAAACACC TAATTACCAA TTTAAGCGTT TCCAGCAACT CCTTGGGCAA GGCATGCATG TCTTTTTCGT TGATATCACC GCTGAGCAAG AATCCGTGTT ACAACAGGTA ACGAGTCAGC ACCCCAGCTT GCGATACGCT GGTGCTGGCG AAGCCACACC AAGTTGGGTT GTTAACGGGC AACACAAGTT TAACCAAGCG ATGAAAGCTA TGCCGTAA
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Protein sequence | MFRHYYITDD LGDLEQVERE LVDNGLTVPQ FHVLSENDAE LEKHHLHAIE SVLKKDVVHS TQLGAVIGII GAFLILLVAY LFNWHMTAVG WIPFGFCAVV VLGFCTWEGG LIGIQTPNYQ FKRFQQLLGQ GMHVFFVDIT AEQESVLQQV TSQHPSLRYA GAGEATPSWV VNGQHKFNQA MKAMP
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