| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1083 |
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| Symbol | |
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| ID | 4172622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1299944 |
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| End bp | 1301398 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638054089 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_660663 |
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| Protein GI | 109897408 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.945146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTAA AAAAGCAGGC CGCGAAAGGT GGATTATGGA TTTCGATTAC GCGTACCGGG
ATAAATGTTA TTGATTTTGC AGTGTTTGTT TATCTTGCTC GTATCCTCAG TTTGGAAGAC
TTTGGTTTAG TGGCGTTTTG TATGCTTTTT GTTGAATTTG CGAACATCGC GGTAAATGCC
GGGGTCAACC AAAACATCGT ACAGCGCAAA AATTGGGATG AGCAGTACGC TTCAAGCACT
ATGATCTATG TGGTTGGCCT TGCTATGGTC GTTGCAGCTG GCTTAGTATT TATTGGCGCT
CCAATTGCGT ATTACACCTA CTCACACTTA GCAGCCTATG TCTTTATGAG CTTGGCGCCG
ATAACTATTT TACTGAGTTT ACAAGTTGTT TTTAACGGTA AGCTGGTAAG AGATTTCAAA
AATAAGCAGA TGGGCGTAGT GAAGTTTATC GCTTCAATTC TTTCTGCCAT CGTTATTATT
ACCCTTGCAG AGCTTGGATA CGGATTATGG TCATTGGTTA TTGGCCGCCT AGTACTCGCC
TCGTTAGAGT TGTTCTTCAT GTCATATATC GCTGACTTTA CCCCCAAGTT TTATTTTAAT
AATGAGTATA AGAAAGAGCT AAGAGAGTTT TGCTTACCGC TTTTGGGATC AGCAGTTTTA
TCGACTGTGA ACCAAAAAAC GGGCTCATTA TTTACAGGTC TAGTGTTGGG GCCAGCCAAT
TTCGCTTTGC TTAATGCAGC AAAAAGAGGC GAAACCATGA TAAACCAAAT CACAATGGGC
TCAATCAACT CTATGGTCGT TCCCAGCTTC TCTCGCGTGA AAGAAGGAGC AAACGTCGGC
GATTTGTACA TTAAGCTGGT TGCTCTTACT GCAACCATCG TTATGCCAAT GTTTATGGGC
CTAGCGGCAA TAGCAGACCC TTTTGTCACT ATTATCTTCG GAGATAAATT TAGTCAAAGT
GCTGTTTTTA TGAGTATATC CGCCTTCGTT ATGTATCCTG CCATTATCGG ATGGTTTTTG
CCTACTTTGC TCGTGTCTCA AGGCAGAACT AATGACGCAT TTAAATTAAC TATTATTAGT
GTAACCAATA GTTTATTAGT AGCGGGGTGT ACCATTTGGT TTGGAATTAC AACCATGTTG
ATTAGCATTG TGATTGCGAA CTTTTTAGTA CTTCCTATAC GTTTCAAAAT TGTAGGCCAG
CACGTTTCAA TTAATATCAA GAAATTGATT TTTTCTGTTT TCCCGCCTTA CTTTAGCGCG
TTTGCCATGT TTGTAAGCAT TATGCTGATT AAACAGTTTT TAACCCCAGT CATTTCGAAT
CAAGTCTTAT TGCTAGTGTT ACTGATAATA GCGGGATGTA TAAGTTATCC ATTATTTAGT
TTCTTATTTT TTTATAAACA TACAATTGAA GAAGTGAAGC AAATGAAAGG CATGTTTTTT
AAAGGCAAGA GGTGA
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| Protein sequence | MSLKKQAAKG GLWISITRTG INVIDFAVFV YLARILSLED FGLVAFCMLF VEFANIAVNA
GVNQNIVQRK NWDEQYASST MIYVVGLAMV VAAGLVFIGA PIAYYTYSHL AAYVFMSLAP
ITILLSLQVV FNGKLVRDFK NKQMGVVKFI ASILSAIVII TLAELGYGLW SLVIGRLVLA
SLELFFMSYI ADFTPKFYFN NEYKKELREF CLPLLGSAVL STVNQKTGSL FTGLVLGPAN
FALLNAAKRG ETMINQITMG SINSMVVPSF SRVKEGANVG DLYIKLVALT ATIVMPMFMG
LAAIADPFVT IIFGDKFSQS AVFMSISAFV MYPAIIGWFL PTLLVSQGRT NDAFKLTIIS
VTNSLLVAGC TIWFGITTML ISIVIANFLV LPIRFKIVGQ HVSINIKKLI FSVFPPYFSA
FAMFVSIMLI KQFLTPVISN QVLLLVLLII AGCISYPLFS FLFFYKHTIE EVKQMKGMFF
KGKR
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