| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1080 |
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| Symbol | |
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| ID | 4172619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1295275 |
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| End bp | 1295922 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054086 |
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| Product | periplasmic protein |
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| Protein accession | YP_660660 |
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| Protein GI | 109897405 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3672] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTT TTTGTTATTT CATTACGATA GTGTTGATTT TATTCATGTT ACGCGCGGTA
GCGGATAGCA ACATTATATT TAACGACGCG TTATTTAATA AAGTACGCAG CGAGTATGAC
AATGAAGCAC TAGAGCGTGT TAGAGCATGG CAGGAACTCC TCAGCAATAA CCTCGATATT
CCCGTTGATG AAAAACTCTA CAGGGTGAAC AATTTCTTCA ATGAGCTTGA ATTTGTCGAC
GACATCAAGC ATTGGGGGAA AGACGATTAT TGGGCCACGC CAGTCGAGTT TTTAGCCTCC
GATGGCGGAG ATTGCGAAGA CTTTGTAATA GCTAAATATT TCAGCTTAAA AGAATTGGGC
GTTCCCGCCG AAAAATTACG CTTGATGTAT GTTACTGCAA CCCGCCTGCG CCAAGCCCAT
ATGGTGCTGG CCTATTACGA ACAATCAAAT TCAGTGCCTT TGGTACTCGA TAATATTAAT
AGACGTATTT TACCCGCTTC ACGCCGCCGC GACTTATTAC CCGTTTACAG CTTTAACGGT
GACGGCCTTT GGTTGGCTAA AGAACAAGGC CGAGGCCAGA AAGTACAGCA AGGGGGTAAT
AATAATTTAT GGAACGATTT AAACCAACGA ATGCAATTAG GCGATTAA
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| Protein sequence | MRFFCYFITI VLILFMLRAV ADSNIIFNDA LFNKVRSEYD NEALERVRAW QELLSNNLDI
PVDEKLYRVN NFFNELEFVD DIKHWGKDDY WATPVEFLAS DGGDCEDFVI AKYFSLKELG
VPAEKLRLMY VTATRLRQAH MVLAYYEQSN SVPLVLDNIN RRILPASRRR DLLPVYSFNG
DGLWLAKEQG RGQKVQQGGN NNLWNDLNQR MQLGD
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