Gene Patl_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0824 
Symbol 
ID4172321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp962928 
End bp964292 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content49% 
IMG OID638053827 
Productglycoside hydrolase family protein 
Protein accessionYP_660406 
Protein GI109897151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000871412 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCTA ACAATAACGG GCCGCTATTA ACGGCCTTAG CGGCAGCGTT TTGCTTGGCT 
GGCTGCCAGC AAGGCAATAG CGATATACCG GCGGCAGCGG CAAAAAGCCC TGTCCCGAGC
TTTTTACCCG ATGCACCTAA GGGCTTTGAA TGGCTGCCCA TTGACAGTAT GTCTGATGAA
TTTAACGCTG GGGAACTCGA TAGCACAAAA TGGCGAGACC ACATTACGAC GTGGCAGGGG
CGCCCTCCGG CCGAGTTTCT GACATCAAAC GTGAAAGTGG CGAACGGCAA TCTTGAGCTA
AAAACGTCGA CTCATCCTAA GCCGAATGAA ACCTATTCCA TGGGGGGCTC TGCGGTGTCT
GGCAAGACTC CTGCCACCTT CGGTTACTTC GAAGCGCGCA TCAAAGCGTC CAAAACCAAA
ATGTCGACAA CGTTTTGGTT GCACTCGGAT GAGTCTGATG ATCGGCACAA AGGATGCGGT
AAATACCACT CCACAGAATT GGATATTCTT GAAACGATTG GCGGCTGGCC AGAGGACAAC
TGGGCTAATG TGATGCGCTC AAACACGCAC TATAAACCGA GCGAAATGGT GGATGGTAAG
TGTAAAGGCG CGCCATACAT TTCAAAGGGC GTAAAATATG ACAGTCAAAA TAAGCTCTCG
GCAGACTTCA ACACCTACTC AATGTGGTGG GTAACGCCAA ATCAAATGCA CTTTTATTTT
AATGGCAATC GTACAGGCAC GGTTAATCTG GCTCATGAGC GCGACCAAGT GCCGTTCAAT
AGTGAAATGT CGCTGCGAAT GGTAGTCGAA ACATACGATT GGCAACCGCA ATGGATACCA
GAAGGGCATG CGCCTTATCC CAATGAGAGC GAGTTAGATG ACCCAAGTAT CAATACTGCT
TACTACGACC ACGTGCGCAG CTACCAGTTG CAATCATCAG CAGATAACCT AATTAATGAT
GCGGGTTTTG AATCATCGTC GCGGGCTGAC AGTTGGCAAT TAGCAGGAAA ACAAGCCACT
TTCTCTGATG AGCCTGACAT GAGTTACACC CAAGCTTGGG GCGTAAAGTT AGGGGCGCAA
AGTCATGCAC AGCAAACGGT GACGTTGGTT GATGAAGGGC AATATGAGAT TACCGTACAC
GCTAAAAATA TCAGCGATAG CGCTGATTCG GGTGGCAGGT TAAGCGTGCT AAGCGAACAA
GGTAAGGTGC TGGATTCTGT TGTGGTTTCA GGGAATGTCT TCTCACCTTA CACCTACAAT
TTTTCAGGCC ATAAAGGGCA GAAAATCACC TTGCGTCTGA GCGGTGCACA AGCGGGCATT
ACTGTGTTTG ATAATGTTGC AATGATGAAG GTTGAGGCCG AATGA
 
Protein sequence
MIANNNGPLL TALAAAFCLA GCQQGNSDIP AAAAKSPVPS FLPDAPKGFE WLPIDSMSDE 
FNAGELDSTK WRDHITTWQG RPPAEFLTSN VKVANGNLEL KTSTHPKPNE TYSMGGSAVS
GKTPATFGYF EARIKASKTK MSTTFWLHSD ESDDRHKGCG KYHSTELDIL ETIGGWPEDN
WANVMRSNTH YKPSEMVDGK CKGAPYISKG VKYDSQNKLS ADFNTYSMWW VTPNQMHFYF
NGNRTGTVNL AHERDQVPFN SEMSLRMVVE TYDWQPQWIP EGHAPYPNES ELDDPSINTA
YYDHVRSYQL QSSADNLIND AGFESSSRAD SWQLAGKQAT FSDEPDMSYT QAWGVKLGAQ
SHAQQTVTLV DEGQYEITVH AKNISDSADS GGRLSVLSEQ GKVLDSVVVS GNVFSPYTYN
FSGHKGQKIT LRLSGAQAGI TVFDNVAMMK VEAE