10 homologs were found in PanDaTox collection
for query gene Patl_0824 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_0824  glycoside hydrolase family protein  100 
 
 		 454 aa  952    Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00000871412  n/a   
 
 
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NC_007492  Pfl01_2825  glycoside hydrolase family protein  27.01 
 
 		 492 aa  65.5  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
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NC_008228  Patl_0843  glycoside hydrolase family protein  28.45 
 
 		 284 aa  64.3  0.000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.146434  n/a   
 
 
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NC_007912  Sde_1175  agarase  25.86 
 
 		 598 aa  61.6  0.00000003  Saccharophagus degradans 2-40  Bacteria  unclonable  0.000000000232044  unclonable  0.000000011081 
 
 
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NC_013037  Dfer_4931  glycoside hydrolase family 16  27.6 
 
 		 286 aa  55.8  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.454153  normal  0.64066 
 
 
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NC_008228  Patl_0805  glycoside hydrolase family protein  24.14 
 
 		 295 aa  54.7  0.000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.841126  n/a   
 
 
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NC_008262  CPR_2607  laminarinase  24.1 
 
 		 883 aa  51.6  0.00003  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
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NC_009718  Fnod_1600  glucan endo-1,3-beta-D-glucosidase  27.21 
 
 		 288 aa  47.4  0.0006  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.715273  n/a   
 
 
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NC_009921  Franean1_7304  glucan endo-1,3-beta-D-glucosidase  28.37 
 
 		 261 aa  46.6  0.0009  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0696013 
 
 
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NC_013132  Cpin_5109  glycoside hydrolase family 16  28.81 
 
 		 409 aa  43.9  0.007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0369397  normal  0.380992 
 
 
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