| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0780 |
|---|
| Symbol | |
|---|
| ID | 4174114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 896649 |
|---|
| End bp | 898076 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638053782 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660362 |
|---|
| Protein GI | 109897107 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.402443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCAG GCCTCGACTT TGGCACGTCA AACTGTTCTA TCGCCGTTAT CGAAAACAAT
ACTCCAGTAC TTATTCCCCT TGAAGATGGA AAATCTCGTT TACCTTCATC GCTGTTTATT
GAACACAGCA ATAGCACACC TGCCGATTTG ACTACGGATA TGATTGCTAA GCAGATCTCT
GCTTTAAAAG AAGATCCACA AGTATCTACT TCACTCAATC ATGAGCAACT GGTGAATATT
GCACGCAAAC AGCTGCGTAA AGCGCATCGC TTAAACACAG CTAACGATCA GCGAGCACAA
AGTATAGTGC AAGCACTTGC AGCCAATGGT GACGTTATTT TCGGGGAGGA GGCTGAGCTA
ACCCATGTCT CTCATCCTGA AAGTGGCTTT TATATTAAAT CTCCCAAGTC GTTTTTAGGG
GCAGACATCA ACGCTACGCA AAGAGCCGTG TTCACCACCA TAGTCGAAAA AATGTTGGCC
TTCATTAAGC AAGAAGCAGA ATGCATTAAG CAGCAAGAGT TCAGCCAAAT CATGATTGGT
CGCCCGGTTA ACTTTCACGG GCTACTCGGT AAGGACGGCA ACAAACAAGC CCTGAGCATT
ATTGATAGCG CAGCGGCAAA AGTTGGCTTT AAAGACGTGC AATTTTTGAT GGAGCCTGTG
GCCGCCGCAT ATGATTATGA GCGCCAATTA AACGAAGACA AGCTGGTGCT GATCCTAGAT
TTAGGTGGGG GCACCACGGA CTGCTCCATG ATCAAGGTCG GCCCAAGTTA CGTGCACTTA
ATCGACAGAC AAGATTGTAT TTTGAGTCAC ACAGGTAAAC GCATCGGGGG TATCGATTTA
GACAATAAAC TGGCGCTGAT GGCCCTGATG CCGGAATTTG GTAAAAATAC GGTACTGAAT
AATGGCTTAC CCGTGCCCAA CCATTTGTTT AAACAAGCGG TGAGCGTTAA CGATGTAGCG
GCTCAGCAAG AGTTTAATGG GCGCCTAACG GGCAAAGATA TTGAAGAGTA TTGCCGCATC
AGCCCCAACC CAAAATTGAA TCGCTTGAAA GCCCTGCGTG ATGGTAAATA TGGTTTACGT
GTTAGCCGCA GTGCAGAAAA AGCAAAAATC TTGCTATCTG ATCAGCAAGA GATTCAGTTG
CCCCTGCATT ATATTGAAGC TGGCTTGGAC ATACCTGTTA GCCGCGCACA GCTAAGCGAT
GCTATTGCCG ATGAGCTAAG TAAGTTTGAG CGCTTAATGA AAGAGGCCAT TACCCAAGCG
GGTGCTACGC CAGACGTGCT TTACGTCACC GGTGGTACGG CGATGTCCCC TGTGGTACAG
CAATGGATAA ACTTGGTCTT TCCCGAGCTA GACATTGTGA TTGGTGATCA TTTTGGCAGT
GTTACCTCAG GGCTGACAAC CCATGCGAAG CGCATCTTCA CCGGGTAA
|
|---|
| Protein sequence | MFAGLDFGTS NCSIAVIENN TPVLIPLEDG KSRLPSSLFI EHSNSTPADL TTDMIAKQIS
ALKEDPQVST SLNHEQLVNI ARKQLRKAHR LNTANDQRAQ SIVQALAANG DVIFGEEAEL
THVSHPESGF YIKSPKSFLG ADINATQRAV FTTIVEKMLA FIKQEAECIK QQEFSQIMIG
RPVNFHGLLG KDGNKQALSI IDSAAAKVGF KDVQFLMEPV AAAYDYERQL NEDKLVLILD
LGGGTTDCSM IKVGPSYVHL IDRQDCILSH TGKRIGGIDL DNKLALMALM PEFGKNTVLN
NGLPVPNHLF KQAVSVNDVA AQQEFNGRLT GKDIEEYCRI SPNPKLNRLK ALRDGKYGLR
VSRSAEKAKI LLSDQQEIQL PLHYIEAGLD IPVSRAQLSD AIADELSKFE RLMKEAITQA
GATPDVLYVT GGTAMSPVVQ QWINLVFPEL DIVIGDHFGS VTSGLTTHAK RIFTG
|
|---|
| |