Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0735 |
Symbol | |
ID | 4173086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 836214 |
End bp | 837404 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638053737 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_660317 |
Protein GI | 109897062 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAAA AAATAATCGA TATGTTCAAA GGAAGAAGAT TGGCCGCTCC ATTAGTTAAT TTGGAGCATA AGGATATGTT TCGTCTTGCA ATGGAGCATT CAGCCATAGG TATGGCGTTA ATATCACCAG ACGGTACCTG GCTAAAAGTC AACAAAGCCA TATGCGATAT CCTTGGTTAC AGCGAGAAAG AACTGCTTAA AATAGATTTC CAATCTATTA CTCATCCTGA GGATCTACAA ACTGACCTTA CTTTTCTTAA GCAAATACTT GCCGGTGACA TACAAACGTA CAACATGGAA AAACGTTACT TCCATAAAAG TGGTCGATTG ATTTGGGCTA AGTTGACGGT GTCTTTAGTA AGAGACAAAG CACAACACCC TCTGTACTTC ATTTCACAAA TTCAAGACAT TACGTTGCAG AAAAAAGCCT CTGTAGATTT GTTGCAAGAC AAGCAAGAAA TGGAGGAGTT TGCCTATCGA CTTACTCATG ATTTACGGTC GCCATTGAGC TCTATGGGCT ATCTTATGAA GATGATCACA CAACAGATTA GTAACGGTGA TTTACAGAGT GCCTTGAAGA CAGTTCAAAC CTCTCACGAC GGGCTCTCTA AATTAAGTGA TTTGGTCAGC GGTGTTTTGG ATGTGAGCAA AGTTAAGCTG CAAGAGGAGA GCTCCCAACC TATTGATGTG TCAGTGATCG TGTGTGAAAC ACTGGCCGCT CTGAGTAATA TGGAAAACTT CGAACGCTTA GACATTGAGA CACGTTTTGA GTACATAGGA ACAATCAACA CTCAGCCCTA TAAATTTACC CAAATAATTG ACAACTTCAT TTCCAATGCG ATTAAGTACC AAGACACGGG TAAGGCCAAT TCTTTTATTC GCGTCTTAAC CTACAAGCTG AACCAAGAGT TCGTGTTGGA GGTACAAGAT AACGGTTTGG GTATTGATGA GGTGTATCGA AAAAAACTAT TTCAAATGTT TGAACGCTTC CATCCTGCGG CTTCAGTGGG TACAGGGCTT GGTCTATACA TGGTTAAAAA AAGTGCAGAT TTAATTGGCG CTAAACTGGT TTATGCGGTT CCTGATAATG GTGAGGGGTC CATTTTTCGT GTGACGCTAC CACTGGATAA CATACCTGCT CTTACTTTAC CTGATAGCGA GATAAAAACG TCGCAACAGT TTGTTCAATA A
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Protein sequence | MVKKIIDMFK GRRLAAPLVN LEHKDMFRLA MEHSAIGMAL ISPDGTWLKV NKAICDILGY SEKELLKIDF QSITHPEDLQ TDLTFLKQIL AGDIQTYNME KRYFHKSGRL IWAKLTVSLV RDKAQHPLYF ISQIQDITLQ KKASVDLLQD KQEMEEFAYR LTHDLRSPLS SMGYLMKMIT QQISNGDLQS ALKTVQTSHD GLSKLSDLVS GVLDVSKVKL QEESSQPIDV SVIVCETLAA LSNMENFERL DIETRFEYIG TINTQPYKFT QIIDNFISNA IKYQDTGKAN SFIRVLTYKL NQEFVLEVQD NGLGIDEVYR KKLFQMFERF HPAASVGTGL GLYMVKKSAD LIGAKLVYAV PDNGEGSIFR VTLPLDNIPA LTLPDSEIKT SQQFVQ
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