Gene Patl_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0587 
Symbol 
ID4173243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp672223 
End bp672912 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID638053589 
Productenoyl-CoA hydratase 
Protein accessionYP_660170 
Protein GI109896915 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TAGTGCAATA CCAATGTGAA AACAATGTAG CAACCATAAC GTTAAATAAC 
GGCAAGGTGA ATGCGTTTTC TCACGCTATG ATCGATCAGC TCAATGGCGC GCTTGATAAA
GCATCAGCGG ATGAGGCTGT AGTGGTCATC AAAGGCCAAC CAGGCATGTT CTCTGCAGGG
TACGATTTAA GCGTGATGCA GGAAAGTATG GAAGCCGCAA TGAAATTAGT TGAGAAAGGT
TCGACATTGA CGCGTAGAAT GCTGTCCTTT GAATATCCTA TCATTGCTGC CTGTACTGGG
CACGCTGTTG CTAAAGGCGC GTTTGTGCTG TTAGCCTCTG ATTATCGAAT TGGGATTCAA
GGTAAGTTTA AAATTGGTTT GAACGAAGTT GCCATTGGCA TGACCATGCA TCAAGCGGGT
TTAGAATTAG CGCGTGGACG ATTAGCCCCA GTGTTTTTTA ATCGTTCCGT GATATTAGCT
GAAATGGTAT CAGTTGATGA TGCCGTAACC GCTGGTTTCC TAGACGTGGC GGTAGCACCG
GACGCATTTG AGCAAACCGT CGCCGCCACC GCGCAAGCGA TGACCAAATT AAATATGAAA
GCCCATAAAC AAACTAAGTT AAAAGCCCGA GCCGGACTGT TAGACGCGCT AGACAGAGCG
ATTGAAGTTG ACCGTGGTTC GAGTCTTTAA
 
Protein sequence
MTELVQYQCE NNVATITLNN GKVNAFSHAM IDQLNGALDK ASADEAVVVI KGQPGMFSAG 
YDLSVMQESM EAAMKLVEKG STLTRRMLSF EYPIIAACTG HAVAKGAFVL LASDYRIGIQ
GKFKIGLNEV AIGMTMHQAG LELARGRLAP VFFNRSVILA EMVSVDDAVT AGFLDVAVAP
DAFEQTVAAT AQAMTKLNMK AHKQTKLKAR AGLLDALDRA IEVDRGSSL