Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0433 |
Symbol | |
ID | 4173724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 510968 |
End bp | 511720 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638053436 |
Product | metallophosphoesterase |
Protein accession | YP_660017 |
Protein GI | 109896762 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0163527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTTTA AAGTGGCGCA AATTTCAGAT TGTCACTTGT TTGCTGATAA ACGCCATGCG GGTTATCAAA ACATAAATCC TTACACTACC TTGCAAGCCG TGTTAAAAAA CGTGGGCCTT TGTCACCCAG ATATGGTCAT TGTGAGCGGT GATGTCAGTG CTGAAAACGA TGCTGTTAAG GGTTTAGCCA GTTATCAGCT TTTTAGTCAA CTGTGGCAAC AAAGCAAGAT TAGCGCGCCA CTTTTAGTCA TTCCAGGTAA CCACGACCAC CTTGAGGCAT TAAATAATGA GCTGAATCAC TTGGCAGGAT GGCCTTTATC CACGAGCGCG GGGCCGTATT GGAAGGTTCA TGGTCTCAAT ACCAAAACTG ATGATTCCTC GGGTGAAATA TCCATGCGTC AACTTCAGTA CCTGAATGAG CAAGTTAACC TGCACCCACA GCAACACCAT TTGCTGGTGG TGCACCATCA TCCTTATGCG TGTGGTGGCT GGATGGACAA CCATCCTTGG CGTAACCGCG ATGAGTTTAT TCAGAATGTT GAGCAGCAGC CGCAAATCAA AGCTGTGATT TATGGGCATA TTCATCAAGC GAGCGAAACA CGCAGCCAAG ATTGCGTATT TATGTCTGCG CCGTCTACAT GCTGGCAGTG GGCAAACAGC AAAGAATTCT CCGCCAGTGG TGAAGCGCCG GGATATCGCG TCATTGAACT GGCTGATAAC GGGCAAGTCG ACAGTCACAT TATTAGAATT TAA
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Protein sequence | MSFKVAQISD CHLFADKRHA GYQNINPYTT LQAVLKNVGL CHPDMVIVSG DVSAENDAVK GLASYQLFSQ LWQQSKISAP LLVIPGNHDH LEALNNELNH LAGWPLSTSA GPYWKVHGLN TKTDDSSGEI SMRQLQYLNE QVNLHPQQHH LLVVHHHPYA CGGWMDNHPW RNRDEFIQNV EQQPQIKAVI YGHIHQASET RSQDCVFMSA PSTCWQWANS KEFSASGEAP GYRVIELADN GQVDSHIIRI
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