| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0389 |
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| Symbol | |
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| ID | 4173479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 444125 |
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| End bp | 444964 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053387 |
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| Product | sterol desaturase |
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| Protein accession | YP_659973 |
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| Protein GI | 109896718 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATG AAGCCTGGTT GCGGATGGGC ACCTTTATAT TAGTGTTGGC CGTCATGATG
ATTTGGGAAG CACTATTGCC AAATCGGGTG TCACCTGTCG CGCGCTACAA ACGCTGGTCG
AGTAATTTTT TCTTGGTTCT TTGCGGCGCG CTAACCGGCA GGTTATTGGC ACCAGCAGGC
CTAGCTGTCG TGGCAATTTA TGCCGATGAG CGGCAATTCG GCGTATTGAA TATATTGCCT
GTGCCTGAAT GGGCGGCTGT TACCTTAGCG GTTATCGCCC TTGATTGCCT GATTTATTGG
CAGCACCGCG TTTTTCATCG GGTGCCATTG TTGTGGCGTT TACATCGGGT ACATCATGCT
GACCCCCATC TCGATGCATC AACAGGCTTA CGTTTTCACC CTATCGAAAT AGCCTTGAGT
TTATCGGTTA AGGGACTTGG TATCCTTTTA TTAGGTGTGC CGGTCATAGC CATTTTAATT
TTTGAGATTG TGCTTAATGC CAGTGCTATT TTTAATCACA GCAACATAAA GCTGCCCAAC
TGGTTGGAAA CGCCGTTGCG AAAGGTGATT GTGACTCAAG CCATGCATCG GATTCATCAT
AGCCAGGTAG TAAAGGAAAC CGATAGTAAT TTTGGTTTTT GTTTGTCTAT TTGGGATCGA
CTATTCCACA GCTACACACG CGAAGCTAAA GCCGGTGATG ACGGCTTAAC GATTGGCTTA
AATGAGTACG ACAAAGAAAG TAATAATACG GGCATCGGTA CCGTACTCAT GATGCCATTT
AGACACACAC CTGAAAAAGA GCGTTGCCAA AAAGAGCGTC GCCAAAAAGA GCGCCGCTAA
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| Protein sequence | MQNEAWLRMG TFILVLAVMM IWEALLPNRV SPVARYKRWS SNFFLVLCGA LTGRLLAPAG
LAVVAIYADE RQFGVLNILP VPEWAAVTLA VIALDCLIYW QHRVFHRVPL LWRLHRVHHA
DPHLDASTGL RFHPIEIALS LSVKGLGILL LGVPVIAILI FEIVLNASAI FNHSNIKLPN
WLETPLRKVI VTQAMHRIHH SQVVKETDSN FGFCLSIWDR LFHSYTREAK AGDDGLTIGL
NEYDKESNNT GIGTVLMMPF RHTPEKERCQ KERRQKERR
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