Gene Patl_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0308 
Symbol 
ID4172902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp357305 
End bp357682 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content49% 
IMG OID638053307 
Productflavoprotein 
Protein accessionYP_659894 
Protein GI109896639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.21882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCAG CTTTGGCCAA CTTGCTTAAT CACTTTGGCA GTTCGTTGTT TTCTTATAAG 
CCTAGCGCCA TCGTCACCTA CTCTGCTGGG CAATGGGGCG GCATGCGCGC AGCCGTGGGC
ATGCGTACGT TTTTATCCGA GCTAGGCTGC CTGCCCGTTT CAGCGATGAT CCACGTTCCT
AAAGCCCAAG AGGTGTTCAC TGAAGATGGC GCACCACAGA CAGGTGAAGA TCAAAGGTCA
TGGTTTGATT ATTTTAGCCG TACATTTACG CAATTAGCTT GGTGGGCACA GGCGACTAAA
ACACACGGTG AAACAGTCAA CCCACATGAA ATGCTTAAGA CATTTAACAC CACACCTGCA
CAAAGAAATG CGCCTTAG
 
Protein sequence
MSPALANLLN HFGSSLFSYK PSAIVTYSAG QWGGMRAAVG MRTFLSELGC LPVSAMIHVP 
KAQEVFTEDG APQTGEDQRS WFDYFSRTFT QLAWWAQATK THGETVNPHE MLKTFNTTPA
QRNAP