| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0123 |
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| Symbol | |
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| ID | 4171805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 145201 |
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| End bp | 148035 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053122 |
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| Product | coagulation factor 5/8 type-like |
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| Protein accession | YP_659709 |
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| Protein GI | 109896454 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TCAAAATGAA TAAAACCACA GTGGCCATGC TGATGGCAAT GAGCACCTTG
TACGGTTGTG GCGGCAGTGC CGATGATCCC AACCCAAGTG ATGCAGTAGA CACGCGTGTT
ACCACAGAGG CGACCCTTGC CGGTGAGGCA GTTAAAGGTC GCTTAGATAG CGCTCAAATC
AGTGTTGAAC AGATGAACAA TTCACCCATC ACTATTATCA ATGGTGAATT AACTGATGCA
TCGGGAGCTG TCAACGTAGT CGTTCAAAGC GACCTTGGGT TTGGCATCAA CAGTCCATTT
AAATTAACCG TAACAGCAAC CGATGCCACC AGCATGATGT GTGATGCTAT TGATTGCGCT
GGGGTAGCTT TAGGCCAAGA ACTAAGTGGC GAGCCGCTAA CAGGGACAGT GCTTAACTCT
TTATCTTTTG TGAACGTGCC TTACGGTTCA GCTGCAAACA GCAGCAGCCT ACCCTTTCAC
GCAAATGCAT TGACTACTAT TGCCACGCCA ATAGTGGAAA GTGCCGTTGC AGGCGGCGCG
AATATCACTC AACAAGTCTT GTTTGATTCC CAGGCCGTTA TCGCATCTGA GTTGGCGCTT
CGCGCATTGG GTGTGGCGAC GTCAGGAGTA AACTTGTTTG AAACTGCCCT AATTAGTGCA
GAGTCTTACG ACAACTTTGT GATGGGTGAA GATTGTGCTC CTGTGACCTC AACAGATGCA
CAAGGCAATG AAGTGACCAT GGATGAGTGT ACGGACGTAT TGGTATCTCC AGCTATTATC
ACTTTATCCT TGGCCAATGC GGCATTTGCG AACATCGCAA CAACCGAAAG CTTTAACGAG
CAGTTTGATG CGGTTAATAC CGCTATTACC ACGGCTATCG AGGGTGACAC CACTGCCCTT
ACGCCTATCA GGGAGCGTTT GCTTGCTTCT GTTAGCGCAG TGCCTTTCTT GTCTGAATTA
GGGGTTTCAG CCGACAGCGT GATTGACCTT GGCTTATCGT TTGCACTTTC TAATGATAGC
AGCGGCCCAG TTCAAGAAGT GACCACTACT GAAAACTTAG CGGGTGCCAC TATCACAGGG
CGTGCGCGCA TCAGTGACGG CGAAGCGGAA ACCATGGCGT TTGATAAAGA CGCGCAAACC
AAATGGTTAG ACAATGGCGG TGTGCCTTCT GTTGAAGACC CAGCTTGGGT TCAGGTTGAG
TTTGCCCAGG CCCATGCGGT GAGCAGTGTG TTCATTACCA GTGCCAATGA TGCGCCAGAA
CGCGACCCTG AAAACTTCGA TTTACTGGCA TCTAATGACG GCGAAAACTG GGTCACGGTG
GCAAGCTTTT TAGGTGAATC TTTTGATGAG CGTTTTGAGC GTAAAGAATT TTCGTTCTCT
AACGGTTTAG CGTATTCGTT TTATCGTTTG AACATCACTA AAAATAAAGG TGACACTAGC
TTAATGCAAT TGGCTGAAAT TCAGCTTGTT GGGCCTATTT ACGCAAGTAC AGATCACACA
GACCCTGTCG GTACAGGTGC GATCAGTGGC CGTGCACGTA TCAGTGATGG TGAAGCAGAA
ACCATGGCGT TTGATAACGA CACACAAACC AAATGGTTAG ATAACGGTGG TGTTCCTTCA
ATTGAAGACC CTTCTTGGGT GCAAGTGGAC TTCCCAGAAG CGGTTGCAGT CAACGTGCTT
GGCATTACCA GTGCCAATGA TGCACCAGAA CGCGACCCAG AGAACTTTAC TTTAGTTGGC
TCAAATGATG GTGGAACGAC TTGGACGGTT ATCGGCGATT GGCTTGGTGA GTCATTCGAC
GAGCGTTTCG AGCGTAAGTT GTTCAGTGCG AGCAATGCAC TGGCATACAG CAGCTACAGA
CTGAATATCA CTAAAAATAA AGGCGATACC AGTTTAATGC AACTGGCAGA AATTGAGTTG
ATTGGTCCTG AAATGCCGAG TGTTCAACAC AGTCACGGCC CAGACGTAAC CTATACTGAG
CGCGCGCGCA TCAGTGACGG TGAAGCAGGT ACTATGGCGT TTGATAACGA TACGCAAACC
AAATGGCTAG ATAACGGCGG TGTTCCGTCG GTAGAAGAGC CGTCTTGGGT CGTGATTGCC
TTGCCTGAAG CCGCAGCTGT GAACACATTG GCTCTAACCA GTGCCAATGA TGCCCCAGAG
CGTGATCCAG AGAACTTTGC GGTTTGGGCA TCAAACGACA ATGAAAATTG GACCGAGCTA
GCCAGTTGGT TAGGTGAGAG CTTTGATGAG CGCTTCGAGC GTAAGCAATA TGCGTTTTCC
AATGATGTTG GCTTTAGCTT TTATCGCTTT AACATTACCA AAAACAAAGG CGATACCAGC
TTAATGCAAA TTGCTGAAAT AGAGCTTATT GGGCCACAGG TTGCTTCGGT TGATATTTCG
TCTGATGCAG GTACCACAAT AACCGGTCGG GCACGCATTA GCGACAACGA AGCCGAAACG
ATGGCCTTTG ACGATGATAC GCAAACCAAA TGGTTAGACA ACGGTGGCGT GCCCAGTGCT
GAAGACCCAG CGTGGGTGCA GCTTGATTTC GTCGCACCAC GTATCGTTAA CAGCATTGCG
ATCACCAGTG CTAACGACTC ACCAGAGCGT GATCCTGAGA ACTTTACCGT TTTGGGCTCA
AATGACGGTG GTGCCACGTG GGACGAAGTC GAATCGTGGA TAGGCGAAAG CTTTGATGCT
CGATTTGAGC GCAAACTGTT CGAAATGCGT AACGGCTTTG CTTACTCGAG CTATCGTATC
AATATCAGCA AAAACAAAGG TGACAGCAAT TTAATGCAAA TTGCAGAAAT CGAGTTAATC
GGCCCAGCTG AATAA
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| Protein sequence | MKKLKMNKTT VAMLMAMSTL YGCGGSADDP NPSDAVDTRV TTEATLAGEA VKGRLDSAQI
SVEQMNNSPI TIINGELTDA SGAVNVVVQS DLGFGINSPF KLTVTATDAT SMMCDAIDCA
GVALGQELSG EPLTGTVLNS LSFVNVPYGS AANSSSLPFH ANALTTIATP IVESAVAGGA
NITQQVLFDS QAVIASELAL RALGVATSGV NLFETALISA ESYDNFVMGE DCAPVTSTDA
QGNEVTMDEC TDVLVSPAII TLSLANAAFA NIATTESFNE QFDAVNTAIT TAIEGDTTAL
TPIRERLLAS VSAVPFLSEL GVSADSVIDL GLSFALSNDS SGPVQEVTTT ENLAGATITG
RARISDGEAE TMAFDKDAQT KWLDNGGVPS VEDPAWVQVE FAQAHAVSSV FITSANDAPE
RDPENFDLLA SNDGENWVTV ASFLGESFDE RFERKEFSFS NGLAYSFYRL NITKNKGDTS
LMQLAEIQLV GPIYASTDHT DPVGTGAISG RARISDGEAE TMAFDNDTQT KWLDNGGVPS
IEDPSWVQVD FPEAVAVNVL GITSANDAPE RDPENFTLVG SNDGGTTWTV IGDWLGESFD
ERFERKLFSA SNALAYSSYR LNITKNKGDT SLMQLAEIEL IGPEMPSVQH SHGPDVTYTE
RARISDGEAG TMAFDNDTQT KWLDNGGVPS VEEPSWVVIA LPEAAAVNTL ALTSANDAPE
RDPENFAVWA SNDNENWTEL ASWLGESFDE RFERKQYAFS NDVGFSFYRF NITKNKGDTS
LMQIAEIELI GPQVASVDIS SDAGTTITGR ARISDNEAET MAFDDDTQTK WLDNGGVPSA
EDPAWVQLDF VAPRIVNSIA ITSANDSPER DPENFTVLGS NDGGATWDEV ESWIGESFDA
RFERKLFEMR NGFAYSSYRI NISKNKGDSN LMQIAEIELI GPAE
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