| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2348 |
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| Symbol | |
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| ID | 5056121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2098994 |
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| End bp | 2100034 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640469899 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_001154543 |
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| Protein GI | 145592541 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0196172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGTAA CTGAACTTGG GAAGCTTATT GGAAAAGAGG CGCGTAGGGA GGTCAAGTTG
GAGGCCCTTG CAGGTAGGTG CGTAGCGCTC GATGCTTATA ACGCTTTGTA CCAATTTTTG
GCGTCTATCA GACAGCCGGA CGGTACTCCT CTTATGGATA GGGCAGGGCG TATCACCAGC
CACATCTCGG GGCTGTTTTA CCGCACGATT AACCTCATGG AGGCGGGTAT TAAGCCCGTC
TACGTCTTTG ACGGAAAGCC TCCTGAGTTT AAGCTCGCCG AGATTGAGGA GAGAAGAAAA
GCTAAGGAGA AGGCCACAGA AGAGCTTGTA AGAGCGATAA AAGAGGGCAG GAGGGATGAG
GTGGCTAAAT ATGCAAAAAG GGCGATATTT CTCACAAACG AGATGGTGGA AGACGCCAAG
AAGCTATTGA CGTATATGGG TGTTCCTTGG GTACAAGCCC CAAGCGAGGG GGAGGCGCAG
GCGGCGTATA TGGCCAGGAG AGGGCACTGC TGGGCTGTGG GGAGCCAAGA TTACGACTCT
CTACTTTTCG GATCGCCTAG GCTTGTCAGA AACCTCGCAA CGTCGCCCAA GCGGAAGGTG
GGCGATGAGG TGGTAGAGCT CTCCCCAGAA ATTATAGAGC TAGATGCCGT CTTGAAATCC
CTTCGCTTAA GGAGCAGGGA GCAACTCATC GACTTGGCCA TTCTGCTGGG CACCGACTAC
AACCCCGATG GGGTGCCGGG TATTGGACCC CAAAGGGCGC TCAAACTCAT ATGGGAGTTC
GGCTCACTTG AGAAGTTGCT AGACACCGTT CTTAGGGGAG TGACATTTCC TATTGATCCT
GTTGAGATAA AGAGGTTTTT CCTTAATCCG CCTGTGACAG ATACTTATAC CACAGATGTG
ACAAAGCCAG ACGACGCGAA GTTGAGGGAC TTTCTCGTGC ATGAGCACGA TTTTGGTGAA
GAGAGAGTTG AGAGAGCACT AGAAAGGCTG AAAAAAGCCA TGGGCAAGTT AAGAACTTCG
GCGCTGGACT CCTTCTTTTA A
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| Protein sequence | MGVTELGKLI GKEARREVKL EALAGRCVAL DAYNALYQFL ASIRQPDGTP LMDRAGRITS
HISGLFYRTI NLMEAGIKPV YVFDGKPPEF KLAEIEERRK AKEKATEELV RAIKEGRRDE
VAKYAKRAIF LTNEMVEDAK KLLTYMGVPW VQAPSEGEAQ AAYMARRGHC WAVGSQDYDS
LLFGSPRLVR NLATSPKRKV GDEVVELSPE IIELDAVLKS LRLRSREQLI DLAILLGTDY
NPDGVPGIGP QRALKLIWEF GSLEKLLDTV LRGVTFPIDP VEIKRFFLNP PVTDTYTTDV
TKPDDAKLRD FLVHEHDFGE ERVERALERL KKAMGKLRTS ALDSFF
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